Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 4
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007904.1-P | Field mustard | golgi, plasma membrane | 88.27 | 88.27 |
| CDY42998 | Canola | golgi, plasma membrane | 88.0 | 88.0 |
| CDY03759 | Canola | plasma membrane | 88.0 | 88.0 |
| CDX68349 | Canola | plasma membrane | 87.47 | 87.94 |
| Bra003959.1-P | Field mustard | golgi, plasma membrane | 87.2 | 87.67 |
| CDY23506 | Canola | plasma membrane | 86.67 | 87.13 |
| CDY38802 | Canola | golgi, plasma membrane, vacuole | 84.8 | 84.8 |
| Bra016228.1-P | Field mustard | extracellular, plasma membrane, vacuole | 81.33 | 84.72 |
| CDY11606 | Canola | plasma membrane | 83.73 | 66.81 |
| AT1G60050.1 | Thale cress | plasma membrane | 58.4 | 58.56 |
| KRH53402 | Soybean | extracellular, plasma membrane | 47.2 | 48.63 |
| KRH53400 | Soybean | plasma membrane | 46.4 | 48.33 |
| VIT_01s0026g00550.t01 | Wine grape | golgi, plasma membrane | 32.0 | 47.43 |
| PGSC0003DMT400061666 | Potato | plasma membrane | 43.2 | 44.14 |
| Solyc04g025750.2.1 | Tomato | plasma membrane | 42.93 | 43.87 |
| Solyc05g005870.2.1 | Tomato | plasma membrane | 42.13 | 42.47 |
| Solyc04g025780.1.1 | Tomato | extracellular | 17.87 | 42.41 |
| PGSC0003DMT400097482 | Potato | extracellular, plasma membrane, plastid | 20.8 | 40.41 |
| AT3G28050.1 | Thale cress | plasma membrane | 33.07 | 33.79 |
| AT5G40210.1 | Thale cress | plasma membrane | 27.47 | 30.38 |
| AT5G40230.1 | Thale cress | plasma membrane | 29.87 | 30.27 |
| AT4G15540.1 | Thale cress | plasma membrane | 27.73 | 29.97 |
| AT5G40240.2 | Thale cress | plasma membrane | 30.4 | 29.84 |
| AT3G28080.1 | Thale cress | golgi, plasma membrane, vacuole | 26.93 | 28.21 |
| AT3G28130.2 | Thale cress | plasma membrane | 26.4 | 27.89 |
| AT3G28070.1 | Thale cress | golgi, plasma membrane, plastid, vacuole | 26.4 | 27.5 |
| AT3G28100.1 | Thale cress | plasma membrane | 25.6 | 27.2 |
| AT3G28060.1 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 10.4 | 25.16 |
Protein Annotations
| MapMan:24.2.1.5 | EntrezGene:843362 | ProteinID:AAB61090.1 | ProteinID:AAB61091.1 | ProteinID:AEE35038.1 | ArrayExpress:AT1G70260 |
| EnsemblPlantsGene:AT1G70260 | RefSeq:AT1G70260 | TAIR:AT1G70260 | RefSeq:AT1G70260-TAIR-G | EnsemblPlants:AT1G70260.1 | TAIR:AT1G70260.1 |
| EMBL:BX815890 | InterPro:EamA_dom | UniProt:F4I5D5 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022857 | GO:GO:0055085 | GO:GO:1900150 | GO:GO:1900425 | GO:GO:1902289 | RefSeq:NP_177183.2 |
| PFAM:PF00892 | PO:PO:0000293 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF61 | SUPFAM:SSF103481 | TMHMM:TMhelix |
| UniParc:UPI000034F51F | InterPro:WAT1-related | SEG:seg | : | : | : |
Description
WAT1-related protein At1g70260 [Source:UniProtKB/Swiss-Prot;Acc:F4I5D5]
Coordinates
chr1:-:26456774..26459570
Molecular Weight (calculated)
42168.9 Da
IEP (calculated)
9.650
GRAVY (calculated)
0.418
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVKVRRDEL VPFVAMAIME ACTIALTIMA KTALTGGMSP FVFVVYTNAF GSILLLPFSF LFHRNERTEQ SIFSWPLLVR VFFLGFTGIF MFQNLAFVGL
101: RFSSPIVVCA MGLQIPSFSF LLSIILGRSK LDWRNTSTRA KLMGTIVSLS GAFVEELYKG PFIRPASSAS PNRFLKSVPK LLVYYNLPDN WFLGCIFLAV
201: AVFSVSLFNV VQTGTVKKYP HVMKVASFYS IVGTIQCLLF SLFMERDLSA WKIQPNFDLY LIIATGTFGS VIRTSVHVKC TQMKGPYYVP LFKPFGIFWA
301: TLFGTSFFVN SLHYGSVLGA AIAGVGYFTV SWGQLKESEE KQSSNEERKS IKTIHHRDED EYKVPLLINQ EESPV
101: RFSSPIVVCA MGLQIPSFSF LLSIILGRSK LDWRNTSTRA KLMGTIVSLS GAFVEELYKG PFIRPASSAS PNRFLKSVPK LLVYYNLPDN WFLGCIFLAV
201: AVFSVSLFNV VQTGTVKKYP HVMKVASFYS IVGTIQCLLF SLFMERDLSA WKIQPNFDLY LIIATGTFGS VIRTSVHVKC TQMKGPYYVP LFKPFGIFWA
301: TLFGTSFFVN SLHYGSVLGA AIAGVGYFTV SWGQLKESEE KQSSNEERKS IKTIHHRDED EYKVPLLINQ EESPV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.