Factsheet for Bra003959.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68349	Canola	plasma membrane	99.73	99.73
Bra007904.1-P	Field mustard	golgi, plasma membrane	91.15	90.67
Bra016228.1-P	Field mustard	extracellular, plasma membrane, vacuole	84.45	87.5
AT1G70260.1	Thale cress	plasma membrane	87.67	87.2
Bra027819.1-P	Field mustard	plasma membrane	60.59	60.59
KRH53400	Soybean	plasma membrane	48.53	50.28
KRH53402	Soybean	extracellular, plasma membrane	47.45	48.63
VIT_01s0026g00550.t01	Wine grape	golgi, plasma membrane	32.98	48.62
Solyc04g025750.2.1	Tomato	plasma membrane	44.77	45.5
PGSC0003DMT400061666	Potato	plasma membrane	44.5	45.23
Solyc04g025780.1.1	Tomato	extracellular	19.03	44.94
Solyc05g005870.2.1	Tomato	plasma membrane	44.5	44.62
PGSC0003DMT400097482	Potato	extracellular, plasma membrane, plastid	20.91	40.41
Bra030336.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	8.58	33.68
Bra039062.1-P	Field mustard	extracellular, plasma membrane, vacuole	30.83	32.49
Bra033035.1-P	Field mustard	plasma membrane	31.9	32.43
Bra030337.1-P	Field mustard	golgi, nucleus, plasma membrane	30.29	31.13
Bra030338.1-P	Field mustard	plasma membrane	28.95	30.95
Bra027523.1-P	Field mustard	plasma membrane, vacuole	14.48	30.51
Bra028452.1-P	Field mustard	golgi, plasma membrane, vacuole	28.69	29.4
Bra025321.1-P	Field mustard	plasma membrane	26.81	26.67
Bra025598.1-P	Field mustard	plasma membrane	17.69	24.54
Bra028450.1-P	Field mustard	plasma membrane	30.03	23.98
Bra025320.1-P	Field mustard	cytosol	29.22	23.85
Bra033037.1-P	Field mustard	golgi, plasma membrane, vacuole	25.47	23.46
Bra028451.1-P	Field mustard	plasma membrane	29.22	14.71

Protein Annotations

EnsemblPlants:Bra003959.1	EnsemblPlants:Bra003959.1-P	EnsemblPlantsGene:Bra003959	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:EamA_dom	InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF61	PFAM:PF00892	SUPFAM:SSF103481
TMHMM:TMhelix	UniParc:UPI00025418FE	UniProt:M4CIC6	MapMan:24.2.1.5	:	:

Description

AT1G70260 (E=1e-192) | nodulin MtN21 family protein

Coordinates

chrA07:+:15967506..15969620

Molecular Weight (calculated)

41911.8 Da

IEP (calculated)

9.616

GRAVY (calculated)

0.476

Length

373 amino acids

Sequence
(BLAST)

001: MKVKVGEFVP FVAMVIMEAC TIALTIMAKT ALTGGMSPFV FVVYTNALGS ILLLPFSFFF HRKDRTKESI FSWPLFVRVF FLGFTGIFLF QNLAFVGLSF
101: SSPIVVCAMG LLIPSFSFLL NLILGRSKLD WRNTSTRARV MGTIISLSGA FSEELYKGPF IRPASSAFPT RLLKSIPKLL VYYNIPDNWF LGCIFLAAAV
201: FSVSLFNVIQ TGTVKKYPHV MKVASFYSIV GTIQCLIFSL FMERDLSAWK IEPNYDLCLI IATGIFGSVI RTSVQVKCTQ MKGPYYVPLF KPFGIFWATL
301: FGTSFFVNSL HYGSVLGAVI GGVGYYTVSW GQLRETEEKQ NSKDERKPIK TIHHHEDDEY KIPLLINQEE SPV

Best Arabidopsis Sequence Match ( AT1G70260.1 )
(BLAST)

001: MEVKVRRDEL VPFVAMAIME ACTIALTIMA KTALTGGMSP FVFVVYTNAF GSILLLPFSF LFHRNERTEQ SIFSWPLLVR VFFLGFTGIF MFQNLAFVGL
101: RFSSPIVVCA MGLQIPSFSF LLSIILGRSK LDWRNTSTRA KLMGTIVSLS GAFVEELYKG PFIRPASSAS PNRFLKSVPK LLVYYNLPDN WFLGCIFLAV
201: AVFSVSLFNV VQTGTVKKYP HVMKVASFYS IVGTIQCLLF SLFMERDLSA WKIQPNFDLY LIIATGTFGS VIRTSVHVKC TQMKGPYYVP LFKPFGIFWA
301: TLFGTSFFVN SLHYGSVLGA AIAGVGYFTV SWGQLKESEE KQSSNEERKS IKTIHHRDED EYKVPLLINQ EESPV

Arabidopsis Description

WAT1-related protein At1g70260 [Source:UniProtKB/Swiss-Prot;Acc:F4I5D5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.