Factsheet for Bra027523.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

plastid 1
mitochondrion 1
cytosol 1
plasma membrane 4
extracellular 2
endoplasmic reticulum 2
vacuole 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59916	Canola	cytosol, plasma membrane, plastid	57.63	94.44
AT5G40210.1	Thale cress	plasma membrane	77.4	40.41
Bra030336.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	20.34	37.89
Bra025321.1-P	Field mustard	plasma membrane	53.11	25.07
Bra039062.1-P	Field mustard	extracellular, plasma membrane, vacuole	47.46	23.73
Bra033035.1-P	Field mustard	plasma membrane	49.15	23.71
Bra033037.1-P	Field mustard	golgi, plasma membrane, vacuole	53.67	23.46
Bra025320.1-P	Field mustard	cytosol	57.06	22.1
Bra030338.1-P	Field mustard	plasma membrane	40.11	20.34
Bra030337.1-P	Field mustard	golgi, nucleus, plasma membrane	41.24	20.11
Bra028452.1-P	Field mustard	golgi, plasma membrane, vacuole	39.55	19.23
Bra025598.1-P	Field mustard	plasma membrane	26.55	17.47
Bra007904.1-P	Field mustard	golgi, plasma membrane	34.46	16.27
Bra016228.1-P	Field mustard	extracellular, plasma membrane, vacuole	31.07	15.28
Bra028450.1-P	Field mustard	plasma membrane	40.11	15.2
Bra003959.1-P	Field mustard	golgi, plasma membrane	30.51	14.48
Bra027819.1-P	Field mustard	plasma membrane	24.86	11.8
Bra028451.1-P	Field mustard	plasma membrane	43.5	10.39

Protein Annotations

EnsemblPlants:Bra027523.1	EnsemblPlants:Bra027523.1-P	EnsemblPlantsGene:Bra027523	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF64	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix
UniParc:UPI00025427D5	UniProt:M4EFG1	MapMan:24.2.1.5	:	:	:

Description

AT5G40210 (E=9e-042) | nodulin MtN21 family protein

Coordinates

chrA09:+:13605399..13606340

Molecular Weight (calculated)

19205.0 Da

IEP (calculated)

8.724

GRAVY (calculated)

0.794

Length

177 amino acids

Sequence
(BLAST)

001: MEKVSIRKDS SLAKVLGTLL SIVGALVVTL YHGPVLMSLQ SDWVIGGGLL ALQNILYSFS YLVMDDSKAW MIRFDKTLIS LVATGILNSV YYIVHTWAVI
101: YKGPVYLSMF KPLSILIAAA STTIFLSESI YLGILIGGIL ISVGFYMVLW GKAKEAKVDI LGTIESSPSH EAPLLGS

Best Arabidopsis Sequence Match ( AT3G28070.2 )
(BLAST)

001: MYVITGYIGI EYSSPTLASA INNITPALTF ILAIIFRMEK VSFKERSSLA KLMGTILSLI GALVVIFYHG PRVFLASSPP YVNFRQFSPP LSSSNSDWLI
101: GGALLTMQGI FVSVSFILQA HIMSVYPAAF RVSFLYTVCV SIVTSTIGLV VEKNNPSVWI IHFDITLITI VTMAIVTSVY YVIHSWTVRH KGPLYLAIFK
201: PLSILIAVVM GAIFLNDSLY LGCLIGGILI TLGFYAVMWG KANEEKDQLS FSEKEKTPLL LNRKNDQV

Arabidopsis Description

WAT1-related protein At3g28070 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYZ7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.