Factsheet for Bra028452.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67449	Canola	golgi, plasma membrane, vacuole	98.35	98.08
Bra030336.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	20.88	80.0
Bra030337.1-P	Field mustard	golgi, nucleus, plasma membrane	75.82	76.03
Bra030338.1-P	Field mustard	plasma membrane	69.23	72.21
Bra025598.1-P	Field mustard	plasma membrane	45.6	61.71
Bra028450.1-P	Field mustard	plasma membrane	68.68	53.53
KRH46524	Soybean	plasma membrane	51.65	51.23
VIT_14s0066g01640.t01	Wine grape	plasma membrane	48.35	49.03
Bra025321.1-P	Field mustard	plasma membrane	43.68	42.4
Bra039062.1-P	Field mustard	extracellular, plasma membrane, vacuole	41.21	42.37
Bra033035.1-P	Field mustard	plasma membrane	42.58	42.23
Bra027523.1-P	Field mustard	plasma membrane, vacuole	19.23	39.55
Bra033037.1-P	Field mustard	golgi, plasma membrane, vacuole	41.76	37.53
Bra028451.1-P	Field mustard	plasma membrane	72.53	35.63
Bra025320.1-P	Field mustard	cytosol	41.48	33.04
Bra007904.1-P	Field mustard	golgi, plasma membrane	29.67	28.8
Bra003959.1-P	Field mustard	golgi, plasma membrane	29.4	28.69
Bra027819.1-P	Field mustard	plasma membrane	28.57	27.88
Bra016228.1-P	Field mustard	extracellular, plasma membrane, vacuole	27.47	27.78

Protein Annotations

EnsemblPlants:Bra028452.1	EnsemblPlants:Bra028452.1-P	EnsemblPlantsGene:Bra028452	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:EamA_dom	InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF48	PFAM:PF00892	SEG:seg
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI00025432B6	UniProt:M4EI37	MapMan:24.2.1.5	:

Description

AT5G40240 (E=2e-161) | nodulin MtN21 family protein

Coordinates

chrA02:-:408309..413217

Molecular Weight (calculated)

40032.7 Da

IEP (calculated)

9.215

GRAVY (calculated)

0.739

Length

364 amino acids

Sequence
(BLAST)

001: MRGEETESWR YFRRDVVPFA AMFAVECATV GSSTVYKAAT LRGLNFYVFI FYTYVISTLI LLPLSIIFGR SRRLPSVKSP LFFKILLLGL VGFMAVLAGC
101: KGIEYSSPTV SSAISNLTPA FTFTLAVIFR MENVRLRSSA TQAKIIGAIV SISGALVVVL YKGPTLFAAA SVSPTISLHK HLTSSESSWI IGGLLITLHY
201: FLTSVWYILQ TRIMEIYPEE ITVVFLYNLC VTLISAPVCL LGERNFTSWI LKPDVSLAAI MYSGVFVTVF SGLTHTWGLH LKGPVYISLF RPLSIVIVVA
301: MGAIFLGDAL HLGSVIGSVI LCIGFYTLIW GKAREDTTKN VAGSEHYSPL LLTHIIEDEA LPLR

Best Arabidopsis Sequence Match ( AT5G40240.3 )
(BLAST)

001: MREAGEEKVA WKYFTRDVVP FAAMFAVECA TVGSNTLFKA ATLRGLSFYV FVFYSYIVST LLLLPLSVIF GRSRRLPAAK SPLFFKIFLL GLVGFMSQIA
101: GCKGIAYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SATQAKIIGA ILSISGALVV VLYKGPQVLA SASFTTVLPT VTLHQQLTSI ESSWIIGGLL
201: LASQYFLISV WYILQTRVME VYPEEITVVF FYNLFATLIS VPVCLFAESN LTSWVLKPDI SLAAIIYSGV FVSLFSALTH TWGLHLKGPV YISLFRPLSI
301: AIAVAMGAIF LGDALHLGSV IGSMILCIGF YTVIWGKARE DTIKTVAGSE QSPLLLTHII EDGAFPLS

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F4KHA9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.