Factsheet for Bra028451.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67448	Canola	plasma membrane	98.11	98.51
Bra030337.1-P	Field mustard	golgi, nucleus, plasma membrane	37.38	76.31
Bra030336.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	9.45	73.68
Bra028452.1-P	Field mustard	golgi, plasma membrane, vacuole	35.63	72.53
Bra030338.1-P	Field mustard	plasma membrane	33.6	71.35
Bra025598.1-P	Field mustard	plasma membrane	22.67	62.45
Bra028450.1-P	Field mustard	plasma membrane	34.28	54.39
KRH46524	Soybean	plasma membrane	25.78	52.04
VIT_14s0066g01640.t01	Wine grape	plasma membrane	24.7	50.97
Bra039062.1-P	Field mustard	extracellular, plasma membrane, vacuole	21.59	45.2
Bra033035.1-P	Field mustard	plasma membrane	22.0	44.41
Bra027523.1-P	Field mustard	plasma membrane, vacuole	10.39	43.5
Bra025321.1-P	Field mustard	plasma membrane	22.0	43.47
Bra033037.1-P	Field mustard	golgi, plasma membrane, vacuole	22.0	40.25
Bra025320.1-P	Field mustard	cytosol	21.05	34.14
Bra027819.1-P	Field mustard	plasma membrane	15.11	30.03
Bra007904.1-P	Field mustard	golgi, plasma membrane	15.11	29.87
Bra003959.1-P	Field mustard	golgi, plasma membrane	14.71	29.22
Bra016228.1-P	Field mustard	extracellular, plasma membrane, vacuole	14.04	28.89

Protein Annotations

EnsemblPlants:Bra028451.1	EnsemblPlants:Bra028451.1-P	EnsemblPlantsGene:Bra028451	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:EamA_dom	InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF48	PFAM:PF00892	SEG:seg
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI00025432B5	UniProt:M4EI36	MapMan:24.2.1.5	:

Description

AT5G40240 (E=8e-151) | nodulin MtN21 family protein

Coordinates

chrA02:-:402707..406725

Molecular Weight (calculated)

80622.7 Da

IEP (calculated)

9.331

GRAVY (calculated)

0.758

Length

741 amino acids

Sequence
(BLAST)

001: MRGAGEETMA WRYLSRDVVP FAAMFTAECA IVGSNTLFKA ATLRGLSFYV FVFYSYLVST LLLLPLSFIF GRSKRLPPSK SPLFFKILLV GFLGFISQIA
101: GCKGIEYSSP TLSSAISNLT PAFTFTLAVI FRMEQVRLRS SGTQAKIIGA VISISGALVI VLYKGPKVLA AASFTSSSPP TISLHQQQMT SFESSWIIGG
201: LLLASQYFLI SIMYILQTRI MEAYPEEIRV VFFYNLIATL ISAPVCFFAE TDLTSWVLKP DMSLAAIIYS GVFVSLFSAL THTWGLHLKG PVYVSLFRPL
301: SIAIAVTMGA LFLGAALHLG SVIGSVILCF GFYTVMWGKA RENSTKAVAG FENSPFLLTH VVEDEHLLSI DNRDLMERGA EEKTVALRYF SKDVVPFAAM
401: VSVECVMVGA NTLFKAATLR GLSFYVYIFY SYVVATIVLL PLSLIFGRSR RLPSAKFPVF VKIFFLAVLG LMSGLVGLKG VEYSSPTLSS AISNLTPAFT
501: FTLAIIFRME QVRLSSSATQ AKIIGTLVSI SGALVVVLYK GPKVLTAASS PSTISLDQHL TSSNSSWMIG GLLLASQYFF ISVWYILQTQ VMAVYPEQIT
601: VIFFYNLFAT LISAPVCFFA ESNLTSWVVK PDISLAAIVY SGVLLSSFGL AIHTWGLHLK GPVYISLFKP LSIVIAVILG AIFLGDALYL GSVIGSVILS
701: LGFYTVIWGK AREDASKTVT GSEQSPLLLT HVVEDEALSL S

Best Arabidopsis Sequence Match ( AT5G40240.3 )
(BLAST)

001: MREAGEEKVA WKYFTRDVVP FAAMFAVECA TVGSNTLFKA ATLRGLSFYV FVFYSYIVST LLLLPLSVIF GRSRRLPAAK SPLFFKIFLL GLVGFMSQIA
101: GCKGIAYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SATQAKIIGA ILSISGALVV VLYKGPQVLA SASFTTVLPT VTLHQQLTSI ESSWIIGGLL
201: LASQYFLISV WYILQTRVME VYPEEITVVF FYNLFATLIS VPVCLFAESN LTSWVLKPDI SLAAIIYSGV FVSLFSALTH TWGLHLKGPV YISLFRPLSI
301: AIAVAMGAIF LGDALHLGSV IGSMILCIGF YTVIWGKARE DTIKTVAGSE QSPLLLTHII EDGAFPLS

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F4KHA9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.