CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028451.1-P	Field mustard	plasma membrane	98.51	98.11
CDY11676	Canola	golgi, plasma membrane, vacuole	45.12	90.98
CDY15932	Canola	golgi, nucleus, plasma membrane	37.67	76.58
CDY11677	Canola	golgi, nucleus, plasma membrane	38.35	76.08
CDX99640	Canola	golgi, plasma membrane, vacuole	35.37	75.87
CDY44581	Canola	plasma membrane	33.33	73.65
CDY36827	Canola	golgi, plasma membrane, plastid	36.72	73.24
CDY11678	Canola	plasma membrane	35.91	72.8
CDY66864	Canola	golgi, plasma membrane, vacuole	34.55	72.65
CDY15931	Canola	extracellular, mitochondrion, plasma membrane, vacuole	9.35	72.63
CDX67449	Canola	golgi, plasma membrane, vacuole	35.91	72.6
CDX99641	Canola	plasma membrane	34.15	72.21
CDY15933	Canola	plasma membrane	34.01	71.71
CDY11675	Canola	golgi, nucleus, plasma membrane	26.02	67.13
CDY38468	Canola	extracellular	10.7	66.95
CDX67447	Canola	plasma membrane	34.15	53.5
KRH46524	Soybean	plasma membrane	26.02	52.32
VIT_14s0066g01640.t01	Wine grape	plasma membrane	24.66	50.7
CDY36829	Canola	plasma membrane	24.8	50.41
CDX99639	Canola	plasma membrane	13.69	50.25
CDY49754	Canola	plasma membrane	21.27	46.04
CDY00140	Canola	golgi, plasma membrane, vacuole	22.36	44.72
CDY20031	Canola	plasma membrane	22.22	44.44
CDY69634	Canola	extracellular	5.15	44.19
CDY13131	Canola	plasma membrane, vacuole	10.57	44.07
CDX85185	Canola	golgi, plasma membrane, vacuole	21.27	43.85
CDY04005	Canola	plasma membrane	21.68	43.6
CDX86450	Canola	plasma membrane	22.09	43.47
CDY44584	Canola	golgi, plasma membrane, plastid	7.32	43.2
CDX95070	Canola	plasma membrane	13.28	42.24
CDX72470	Canola	plasma membrane	13.28	42.24
CDX85184	Canola	plasma membrane	20.73	42.15
CDY53118	Canola	plasma membrane	18.97	41.67
CDY59916	Canola	cytosol, plasma membrane, plastid	5.96	40.74
CDX86451	Canola	cytosol	20.87	34.61
CDY04006	Canola	cytosol, peroxisome, plasma membrane	15.58	32.58
CDY59918	Canola	extracellular	5.69	32.06
CDY03759	Canola	plasma membrane	15.18	29.87
CDY61698	Canola	plasma membrane	14.91	29.49
CDY42998	Canola	golgi, plasma membrane	14.91	29.33
CDX68349	Canola	plasma membrane	14.77	29.22
CDY65646	Canola	extracellular, plasma membrane	11.79	28.43
CDY23506	Canola	plasma membrane	14.36	28.42
CDY38802	Canola	golgi, plasma membrane, vacuole	14.23	28.0
CDY11606	Canola	plasma membrane	14.36	22.55

Protein Annotations

EnsemblPlants:CDX67448	EnsemblPlantsGene:GSBRNA2T00098551001	GO:A0A078BWQ9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	InterPro:EamA_dom
InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF48	PFAM:PF00892	ProteinID:CDX67448	ProteinID:CDX67448.1
SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0004EEE839	MapMan:24.2.1.5	:

Description

BnaA07g14880D

Coordinates

chrLK031787:-:309103..313780

Molecular Weight (calculated)

80111.1 Da

IEP (calculated)

9.399

GRAVY (calculated)

0.777

Length

738 amino acids

Sequence
(BLAST)

001: MRGAGEETVA WRYLSRDVVP FAAMFTAECA IVGSNTLFKA ATLRGLSFYV FVFYSYLVST LLLLPLSFIF GRSKRLPPSK SPLFFKILLV GFLGFISQIA
101: GCKGIEYSSP TLSSAISNLT PAFTFTLAVI FRMEQVRLRS SGTQAKIIGA VISISGALVI VLYKGPKVLA AASLISSSPP TISLHQQQMT SFESSWIIGG
201: LLLASQYFLI SIMYILQTRI MEAYPEEIRV VFFYNLIATL ISAPVCFLAE TDLTSWVLKP DMSLAAIIYS GVFVSLFSAL THTWGLHLKG PVYVSLFRPL
301: SIAIAVTMGA LFLGASLHLG SVIGSVILCF GFYTVMWGKA RENSTKAAAG FENSPFLLTH VVEDEHLLTT DLMARGAEEK TVALRYFSKD VVPFAAMVSV
401: ECVMVGANTL FKAATLRGLS FYVYIFYSYV VATIVLLPLS LIFGRSRRLP SAKFPLFVKI FFLAVLGLMS GLVGLKGVEY SSPTLSSAIS NLTPAFTFTL
501: AIIFRMEQVR LSSSATQAKI IGTLVSISGA LVVVLYKGPK VLTAASSPST ISLDQHLTSS NSSWMIGGLL LASQYFFISV WYILQTQVMA VYPEQITVIF
601: FYNLFATLIS APVCFFAESN LTSWVVKPDI SLAAIVYSGV LLSSYGLAIH TWGLHLKGPV YISLFKPLSI VIAVILGAIF LGDALYLGSV IGSVILSLGF
701: YTVIWGKARE DASKTVTGSE QSPLLLTHVV EDEALSLS

Best Arabidopsis Sequence Match ( AT5G40240.3 )
(BLAST)

001: MREAGEEKVA WKYFTRDVVP FAAMFAVECA TVGSNTLFKA ATLRGLSFYV FVFYSYIVST LLLLPLSVIF GRSRRLPAAK SPLFFKIFLL GLVGFMSQIA
101: GCKGIAYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SATQAKIIGA ILSISGALVV VLYKGPQVLA SASFTTVLPT VTLHQQLTSI ESSWIIGGLL
201: LASQYFLISV WYILQTRVME VYPEEITVVF FYNLFATLIS VPVCLFAESN LTSWVLKPDI SLAAIIYSGV FVSLFSALTH TWGLHLKGPV YISLFRPLSI
301: AIAVAMGAIF LGDALHLGSV IGSMILCIGF YTVIWGKARE DTIKTVAGSE QSPLLLTHII EDGAFPLS

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F4KHA9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.