Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44581 | Canola | plasma membrane | 84.59 | 93.71 |
| CDY15931 | Canola | extracellular, mitochondrion, plasma membrane, vacuole | 21.08 | 82.11 |
| CDY15932 | Canola | golgi, nucleus, plasma membrane | 76.49 | 77.96 |
| CDY11678 | Canola | plasma membrane | 75.95 | 77.2 |
| CDX67449 | Canola | golgi, plasma membrane, vacuole | 75.68 | 76.71 |
| CDY11677 | Canola | golgi, nucleus, plasma membrane | 77.03 | 76.61 |
| Bra025598.1-P | Field mustard | plasma membrane | 55.14 | 75.84 |
| CDX99640 | Canola | golgi, plasma membrane, vacuole | 70.27 | 75.58 |
| CDY11676 | Canola | golgi, plasma membrane, vacuole | 73.24 | 74.04 |
| CDX99641 | Canola | plasma membrane | 65.41 | 69.34 |
| CDY15933 | Canola | plasma membrane | 65.14 | 68.86 |
| CDY38468 | Canola | extracellular | 21.62 | 67.8 |
| CDY66864 | Canola | golgi, plasma membrane, vacuole | 63.78 | 67.24 |
| CDY36829 | Canola | plasma membrane | 62.7 | 63.91 |
| CDY11675 | Canola | golgi, nucleus, plasma membrane | 47.84 | 61.89 |
| CDX99639 | Canola | plasma membrane | 30.0 | 55.22 |
| KRH46524 | Soybean | plasma membrane | 51.89 | 52.32 |
| CDX67447 | Canola | plasma membrane | 63.78 | 50.11 |
| VIT_14s0066g01640.t01 | Wine grape | plasma membrane | 46.76 | 48.19 |
| CDY44584 | Canola | golgi, plasma membrane, plastid | 16.22 | 48.0 |
| CDY49754 | Canola | plasma membrane | 40.81 | 44.28 |
| CDY13131 | Canola | plasma membrane, vacuole | 21.08 | 44.07 |
| CDY00140 | Canola | golgi, plasma membrane, vacuole | 42.97 | 43.09 |
| CDY69634 | Canola | extracellular | 10.0 | 43.02 |
| CDY20031 | Canola | plasma membrane | 42.43 | 42.55 |
| CDY53118 | Canola | plasma membrane | 38.38 | 42.26 |
| CDY04005 | Canola | plasma membrane | 41.89 | 42.23 |
| CDX85185 | Canola | golgi, plasma membrane, vacuole | 40.81 | 42.18 |
| CDX86450 | Canola | plasma membrane | 42.16 | 41.6 |
| CDX95070 | Canola | plasma membrane | 25.95 | 41.38 |
| CDX72470 | Canola | plasma membrane | 25.95 | 41.38 |
| CDX85184 | Canola | plasma membrane | 40.0 | 40.77 |
| CDY59916 | Canola | cytosol, plasma membrane, plastid | 11.35 | 38.89 |
| CDY59918 | Canola | extracellular | 13.51 | 38.17 |
| CDX67448 | Canola | plasma membrane | 73.24 | 36.72 |
| CDX86451 | Canola | cytosol | 40.27 | 33.48 |
| CDY03759 | Canola | plasma membrane | 32.43 | 32.0 |
| CDY42998 | Canola | golgi, plasma membrane | 31.62 | 31.2 |
| CDY04006 | Canola | cytosol, peroxisome, plasma membrane | 29.73 | 31.16 |
| CDX68349 | Canola | plasma membrane | 31.08 | 30.83 |
| CDY23506 | Canola | plasma membrane | 31.08 | 30.83 |
| CDY61698 | Canola | plasma membrane | 29.46 | 29.22 |
| CDY38802 | Canola | golgi, plasma membrane, vacuole | 29.46 | 29.07 |
| CDY65646 | Canola | extracellular, plasma membrane | 22.97 | 27.78 |
| CDY11606 | Canola | plasma membrane | 30.0 | 23.62 |
Protein Annotations
| MapMan:24.2.1.5 | GO:A0A078HG84 | UniProt:A0A078HG84 | EnsemblPlants:CDY36827 | ProteinID:CDY36827 | ProteinID:CDY36827.1 |
| InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00062672001 | PFAM:PF00892 |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF48 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EF4357 | InterPro:WAT1-related |
| SEG:seg | : | : | : | : | : |
Description
BnaC04g32200DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078HG84]
Coordinates
chrLK032384:-:153828..156096
Molecular Weight (calculated)
40444.7 Da
IEP (calculated)
8.882
GRAVY (calculated)
0.638
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRTGEETVA WRYFHRDVVP FAAMFAVECS TVGSNTLYKA ASLRGLNFYV FIFYSYAAST LVLLPLALIF GRSKKLPSAK SPLFFEMLLL GLFGCMAQMV
101: GFKGVEQSSP TLSSAMSNLT PAFTFTLAVI FRMEQVVLRS SATQAKIIGG VLSISGALVV VLYKGPKVLS AASFTLSSSP TSSLHQHLTS SESSWIVGGL
201: LLASQFFFVS VWYIVQTLVM ELYPEEITVV FFYNLFATLV SAPICFLAER NWTSWMLKPD ITLAAIVYSG VFASVFSVLT HTWGLHLKGP VYVSLFRPLS
301: IAIAVAMGAI FLSDALHLGS VIGSVILCFG FYTVIWGKKR EDSTKNLAGS EHCAPLLLTH TVEDEGSSLR
101: GFKGVEQSSP TLSSAMSNLT PAFTFTLAVI FRMEQVVLRS SATQAKIIGG VLSISGALVV VLYKGPKVLS AASFTLSSSP TSSLHQHLTS SESSWIVGGL
201: LLASQFFFVS VWYIVQTLVM ELYPEEITVV FFYNLFATLV SAPICFLAER NWTSWMLKPD ITLAAIVYSG VFASVFSVLT HTWGLHLKGP VYVSLFRPLS
301: IAIAVAMGAI FLSDALHLGS VIGSVILCFG FYTVIWGKKR EDSTKNLAGS EHCAPLLLTH TVEDEGSSLR
001: MREETVSWKY FKRDVVPFTA MIAIECTTVG SSILYKAATL RGFSFYVFVF YAYVGATLVL LLLSLIFGRS RSLPTAKSSL FFKIFLLALL GLTSRVAGCK
101: GIEYSSPTLS SAISNLTPAF TFILAIFFRM EQVMLRSSAT QAKIIGTIVS ISGALVIVLY KGPKLLVAAS FTSFESSWII GGLLLGLQFL LLSVWFILQT
201: HIMEIYPEEI AVVFCYNLCA TLISGTVCLL VEKDLNSWQL KPGFSLASVI YSGLFDTSLG SVIHTWGLHV KGPVYISLFK PLSIAIAVAM AAIFLGDTLH
301: LGSVIGSVIL SFGFYTVIWG KAREDSTKTV SDSEQSLLLP SHDREED
101: GIEYSSPTLS SAISNLTPAF TFILAIFFRM EQVMLRSSAT QAKIIGTIVS ISGALVIVLY KGPKLLVAAS FTSFESSWII GGLLLGLQFL LLSVWFILQT
201: HIMEIYPEEI AVVFCYNLCA TLISGTVCLL VEKDLNSWQL KPGFSLASVI YSGLFDTSLG SVIHTWGLHV KGPVYISLFK PLSIAIAVAM AAIFLGDTLH
301: LGSVIGSVIL SFGFYTVIWG KAREDSTKTV SDSEQSLLLP SHDREED
Arabidopsis Description
WAT1-related protein At4g15540 [Source:UniProtKB/Swiss-Prot;Acc:F4JK59]
SUBAcon: [plasma membrane,golgi,nucleus]
SUBAcon: [plasma membrane,golgi,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.