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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 3
  • golgi 3
  • plasma membrane 6
  • endoplasmic reticulum 3
  • vacuole 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY65646 Canola extracellular, plasma membrane 78.02 95.1
AT1G60050.1 Thale cress plasma membrane 91.42 91.18
CDX68349 Canola plasma membrane 60.86 60.86
CDY23506 Canola plasma membrane 60.59 60.59
CDY03759 Canola plasma membrane 60.05 59.73
CDY38802 Canola golgi, plasma membrane, vacuole 59.52 59.2
CDY42998 Canola golgi, plasma membrane 59.52 59.2
CDY11606 Canola plasma membrane 59.52 47.23
VIT_01s0026g00550.t01 Wine grape golgi, plasma membrane 30.56 45.06
KRH53400 Soybean plasma membrane 42.63 44.17
Solyc05g005870.2.1 Tomato plasma membrane 42.36 42.47
Solyc04g025750.2.1 Tomato plasma membrane 41.55 42.23
PGSC0003DMT400061666 Potato plasma membrane 41.55 42.23
KRH53402 Soybean extracellular, plasma membrane 41.02 42.03
Solyc04g025780.1.1 Tomato extracellular 17.43 41.14
PGSC0003DMT400097482 Potato extracellular, plasma membrane, plastid 19.3 37.31
CDY69634 Canola extracellular 8.04 34.88
CDY44584 Canola golgi, plasma membrane, plastid 11.53 34.4
CDY66864 Canola golgi, plasma membrane, vacuole 29.49 31.34
CDY11676 Canola golgi, plasma membrane, vacuole 30.03 30.6
CDY15931 Canola extracellular, mitochondrion, plasma membrane, vacuole 7.77 30.53
CDY44581 Canola plasma membrane 27.08 30.24
CDY11677 Canola golgi, nucleus, plasma membrane 30.03 30.11
CDY04005 Canola plasma membrane 29.49 29.97
CDX99640 Canola golgi, plasma membrane, vacuole 27.61 29.94
CDY00140 Canola golgi, plasma membrane, vacuole 29.49 29.81
CDY20031 Canola plasma membrane 29.49 29.81
CDX99641 Canola plasma membrane 27.61 29.51
CDY15932 Canola golgi, nucleus, plasma membrane 28.69 29.48
CDY36827 Canola golgi, plasma membrane, plastid 29.22 29.46
CDY15933 Canola plasma membrane 27.61 29.43
CDX85184 Canola plasma membrane 28.42 29.2
CDY38468 Canola extracellular 9.12 28.81
CDY49754 Canola plasma membrane 26.01 28.45
CDY11675 Canola golgi, nucleus, plasma membrane 21.72 28.32
CDY11678 Canola plasma membrane 27.61 28.3
CDX67449 Canola golgi, plasma membrane, vacuole 27.61 28.22
CDY53118 Canola plasma membrane 25.2 27.98
CDX85185 Canola golgi, plasma membrane, vacuole 24.93 25.98
CDY59918 Canola extracellular 9.12 25.95
CDX95070 Canola plasma membrane 16.09 25.86
CDX72470 Canola plasma membrane 16.09 25.86
CDX86450 Canola plasma membrane 25.74 25.6
CDX99639 Canola plasma membrane 13.67 25.37
CDY59916 Canola cytosol, plasma membrane, plastid 7.24 25.0
CDY13131 Canola plasma membrane, vacuole 11.8 24.86
CDX86451 Canola cytosol 28.15 23.6
CDX67447 Canola plasma membrane 27.61 21.87
CDY04006 Canola cytosol, peroxisome, plasma membrane 19.03 20.11
CDY36829 Canola plasma membrane 19.3 19.83
CDX67448 Canola plasma membrane 29.49 14.91
Protein Annotations
MapMan:24.2.1.5GO:A0A078JBB6UniProt:A0A078JBB6EnsemblPlants:CDY61698ProteinID:CDY61698ProteinID:CDY61698.1
InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00034238001PFAM:PF00892
PANTHER:PTHR31218PANTHER:PTHR31218:SF61TMHMM:TMhelixUniParc:UPI0004EF10BAInterPro:WAT1-relatedSEG:seg
Description
BnaCnng38340DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078JBB6]
Coordinates
chrLK034028:-:19849..23147
Molecular Weight (calculated)
41196.5 Da
IEP (calculated)
6.116
GRAVY (calculated)
0.515
Length
373 amino acids
Sequence
(BLAST)
001: MGLMEARWEN IVPFIAMALM EACTIALTIL AKTALTGGMS PFVFIVYTNA LGSLLLLPYS FFFHRDERDD EPFLTKPSVV RIFLLGFTGV FLYQNLAFLG
101: LSYSSPIVVC AMGLQSPAFS FLLSIALGEG GLGWECKRTR GRVIGTLICF TGAFVEVIYL GPFIRPSPSS SPNSNFLTTI SHYLTFFKNS DNWALGSLFL
201: ACATLSISIW NIIQLDTVQK YPQVMKVVSA YSLAGTLQCA IFSAFMEPDL SAWKLELNMD FYLIIATGIF GSIIRTSVQV KCSKMKGPYY VPLFKPFGIL
301: WASIFGTSFF VNSLHYGSVL GAAIAGTGYL LIMWSQVQRD VQKDMVEEKV NHQLDSDDQI TPLLLGNGDV DQV
Best Arabidopsis Sequence Match ( AT1G60050.1 )
(BLAST)
001: MGLMDTRWET IVPFIVMALM EACTIALTIL AKTALTGGMS PFVFIVYTNA LGSLLLLPYS FYFHRDESDD EPFLTKPSLV RIFLLGFTGV FLFQNMAFLG
101: LSYSSPIVVC AMGLQSPAFS FLLSLALGKE GGLGWASKRT KGRVIGTLIC FTGAFVEVIY LGPFIRPSPP SSPTSNFLTT ISHYLTFFKN SDNWALGSLL
201: LACATLSISI WNIIQLDTVQ KYPQVMKVVS AYSLAGTLQC AIFSAFMEPD LSAWELKLNM DLYLIIATGI FGSIIRTSVQ VKCSKMKGPY YVPLFKPFGI
301: LWASIFGTSF FVNSLHYGSV LGAAIAGTGY LLIMWSQVQK DDPNETVEKN DNHQLDSDEQ TTPLLLANGD FDQV
Arabidopsis Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178WGH0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.