CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025320.1-P	Field mustard	cytosol	100.0	97.37
CDX85184	Canola	plasma membrane	78.88	96.69
AT3G28060.1	Thale cress	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	26.97	77.42
CDY44584	Canola	golgi, plasma membrane, plastid	16.85	60.0
CDY13131	Canola	plasma membrane, vacuole	22.7	57.06
CDY53118	Canola	plasma membrane	41.8	55.36
CDY49754	Canola	plasma membrane	41.8	54.55
CDY69634	Canola	extracellular	10.34	53.49
CDY59918	Canola	extracellular	15.51	52.67
CDX85185	Canola	golgi, plasma membrane, vacuole	41.12	51.12
CDY59916	Canola	cytosol, plasma membrane, plastid	12.36	50.93
CDX86450	Canola	plasma membrane	42.47	50.4
CDX95070	Canola	plasma membrane	26.07	50.0
CDX72470	Canola	plasma membrane	26.07	50.0
CDY04005	Canola	plasma membrane	40.9	49.59
CDY20031	Canola	plasma membrane	40.9	49.32
CDY00140	Canola	golgi, plasma membrane, vacuole	40.9	49.32
CDX99640	Canola	golgi, plasma membrane, vacuole	34.16	44.19
CDY15931	Canola	extracellular, mitochondrion, plasma membrane, vacuole	9.21	43.16
CDX67449	Canola	golgi, plasma membrane, vacuole	35.06	42.74
CDY15932	Canola	golgi, nucleus, plasma membrane	34.83	42.7
CDY11678	Canola	plasma membrane	34.61	42.31
CDY11676	Canola	golgi, plasma membrane, vacuole	34.61	42.08
CDY11677	Canola	golgi, nucleus, plasma membrane	35.06	41.94
CDY66864	Canola	golgi, plasma membrane, vacuole	32.81	41.6
CDY44581	Canola	plasma membrane	30.79	41.02
CDX99641	Canola	plasma membrane	32.13	40.97
CDY15933	Canola	plasma membrane	32.13	40.86
CDY11675	Canola	golgi, nucleus, plasma membrane	26.07	40.56
CDY36827	Canola	golgi, plasma membrane, plastid	33.48	40.27
CDY38468	Canola	extracellular	10.56	39.83
CDY04006	Canola	cytosol, peroxisome, plasma membrane	29.66	37.39
CDX99639	Canola	plasma membrane	16.63	36.82
CDX67447	Canola	plasma membrane	34.16	32.27
CDY36829	Canola	plasma membrane	24.94	30.58
CDY23506	Canola	plasma membrane	25.39	30.29
CDY42998	Canola	golgi, plasma membrane	25.39	30.13
CDY03759	Canola	plasma membrane	24.94	29.6
CDY38802	Canola	golgi, plasma membrane, vacuole	24.72	29.33
CDX68349	Canola	plasma membrane	24.49	29.22
CDY61698	Canola	plasma membrane	23.6	28.15
CDY65646	Canola	extracellular, plasma membrane	17.53	25.49
CDY11606	Canola	plasma membrane	24.27	22.98
CDX67448	Canola	plasma membrane	34.61	20.87

Protein Annotations

MapMan:24.2.1.5	GO:A0A078DB06	EnsemblPlants:CDX86451	ProteinID:CDX86451	ProteinID:CDX86451.1	InterPro:EamA_dom
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	EnsemblPlantsGene:GSBRNA2T00144599001	PFAM:PF00892	PANTHER:PTHR31218	PANTHER:PTHR31218:SF64
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0004EE1C68	InterPro:WAT1-related	SEG:seg	:

Description

BnaA06g31680D

Coordinates

chrLK031845:-:1624994..1628789

Molecular Weight (calculated)

48222.3 Da

IEP (calculated)

8.250

GRAVY (calculated)

0.387

Length

445 amino acids

Sequence
(BLAST)

001: MCLNVVDLSL IRAKCNNDRV YTVMWGKAKE VPMVEDDNKA DDPIETGTDC PSSDNNIGQA PHEKSSRFRE SFQVPKEENQ TTMAGRLCQR DGWIMTAMVA
101: VVVSDVGMNT LFKAASSKGM SSYVFLVYSY GIGALLLLPS PFLTHRSGSL PPLKFSVLCK MGLLGLLGCV YLMLGYTGIK YSSPTLASAM SNLTPAFTFI
201: FALLFGMEKV SIKKNSSIAK VVGTIVSIVG ALVVTLYHGP IIFAASQPSV HLPQPLSPPP SPPLNSNWVI GGCLLALEYT LIAISYIIQT HIMREYASEF
301: ALALSHNICV SVSCAFVSLF VETNNPSAWI MRSSIMLICI VATGMVNSTG YVVESWTVRH KGPLFLAMFR PLAILTAVVL GAIFLGDSLY LGSVIGGTLI
401: SIGFYTVMWG KAKEEKSEID THHAASSSHS KRVPLLMNYA AEKQV

Best Arabidopsis Sequence Match ( AT5G40210.1 )
(BLAST)

001: MVHGRLCNRD GWILTAMVVT EFSNVGVNTL VKAATSKGLS PFVVLVYSYT FGSLLLLPLT FFSFRSRSLP PLTFSILCNM GILGLIASAF QILGYNGIKY
101: SSPTLSSAMS NVNPAFTFIL AVVFRMENIS LGKKSSVAKV LGTILSIIGA LVVTLYHGPM LMSSHSDWII GGGLLALQYI LVSVSYLVMA HTMGRYPSAV
201: VVTLVHNVCI AVVCAFVSLL AEKDNPKAWV IRFDITLITV VATGILNSGY YVIHTWAVSH KGPVYLSMFK PLSILIAAVS TFIFLGESLY LGSVMGGILI
301: SIGFYMVLWG KAKEDKVDII GAIESSPSHN APLLDNFKS

Arabidopsis Description

WAT1-related protein At5g40210 [Source:UniProtKB/Swiss-Prot;Acc:Q945L4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.