Factsheet for Bra030337.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, nucleus

Predictor Summary:

nucleus 2
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, nucleus, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15932	Canola	golgi, nucleus, plasma membrane	100.0	100.0
CDX99640	Canola	golgi, plasma membrane, vacuole	90.36	95.35
Bra030336.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	22.86	87.37
AT5G40240.2	Thale cress	plasma membrane	84.02	79.84
Bra028452.1-P	Field mustard	golgi, plasma membrane, vacuole	76.03	75.82
Bra030338.1-P	Field mustard	plasma membrane	70.52	73.35
Bra025598.1-P	Field mustard	plasma membrane	48.48	65.43
Bra028450.1-P	Field mustard	plasma membrane	68.59	53.32
KRH46524	Soybean	plasma membrane	52.34	51.77
VIT_14s0066g01640.t01	Wine grape	plasma membrane	50.96	51.53
Bra033035.1-P	Field mustard	plasma membrane	44.63	44.14
Bra039062.1-P	Field mustard	extracellular, plasma membrane, vacuole	42.98	44.07
Bra025321.1-P	Field mustard	plasma membrane	44.35	42.93
Bra027523.1-P	Field mustard	plasma membrane, vacuole	20.11	41.24
Bra033037.1-P	Field mustard	golgi, plasma membrane, vacuole	42.42	38.02
Bra028451.1-P	Field mustard	plasma membrane	76.31	37.38
Bra025320.1-P	Field mustard	cytosol	42.7	33.92
Bra007904.1-P	Field mustard	golgi, plasma membrane	31.68	30.67
Bra003959.1-P	Field mustard	golgi, plasma membrane	31.13	30.29
Bra016228.1-P	Field mustard	extracellular, plasma membrane, vacuole	29.2	29.44
Bra027819.1-P	Field mustard	plasma membrane	29.75	28.95

Protein Annotations

EnsemblPlants:Bra030337.1	EnsemblPlants:Bra030337.1-P	EnsemblPlantsGene:Bra030337	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:EamA_dom	InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF48	PFAM:PF00892	SEG:seg
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0002543A5F	UniProt:M4ENG7	MapMan:24.2.1.5	:

Description

AT5G40240 (E=2e-156) | nodulin MtN21 family protein

Coordinates

chrA04:-:9026222..9028046

Molecular Weight (calculated)

39770.1 Da

IEP (calculated)

9.642

GRAVY (calculated)

0.709

Length

363 amino acids

Sequence
(BLAST)

001: MRGAREETVA WRYFSRDVVP FAAMFTVECT TVGANTLYKA ASLRGLSFYV FVFYSYLVST LLLLPLSLIF GRSRRLPPAK SPLFFKIFIL GLLGFMSQIA
101: ACKGIEYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SASQAKIIGA ILSISGALVI VLYKGPKVLS GASFTPSSSL PISVDQNLTS SDSSWMIGGL
201: FLASQYFLLS VWYILQTRVM ETYPEEIRVV FFYNLFAMII SAPVCLFLER NLTSWVLKPD ISLAAIVYSG FFVSLFSALT HTWGLHLKGA VYISLFRPLS
301: IAIAVAMGAI FLGDALPLGS VIGSMILCFG FYTVIWGKAR EDSTKTVAGS EHSPLLLTHV VGD

Best Arabidopsis Sequence Match ( AT5G40240.3 )
(BLAST)

001: MREAGEEKVA WKYFTRDVVP FAAMFAVECA TVGSNTLFKA ATLRGLSFYV FVFYSYIVST LLLLPLSVIF GRSRRLPAAK SPLFFKIFLL GLVGFMSQIA
101: GCKGIAYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SATQAKIIGA ILSISGALVV VLYKGPQVLA SASFTTVLPT VTLHQQLTSI ESSWIIGGLL
201: LASQYFLISV WYILQTRVME VYPEEITVVF FYNLFATLIS VPVCLFAESN LTSWVLKPDI SLAAIIYSGV FVSLFSALTH TWGLHLKGPV YISLFRPLSI
301: AIAVAMGAIF LGDALHLGSV IGSMILCIGF YTVIWGKARE DTIKTVAGSE QSPLLLTHII EDGAFPLS

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F4KHA9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.