Factsheet for AT5G40210.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44584	Canola	golgi, plasma membrane, plastid	30.97	84.0
CDY53118	Canola	plasma membrane	80.83	81.55
Bra027523.1-P	Field mustard	plasma membrane, vacuole	40.41	77.4
CDY13131	Canola	plasma membrane, vacuole	40.41	77.4
CDY59916	Canola	cytosol, plasma membrane, plastid	24.19	75.93
CDY59918	Canola	extracellular	24.48	63.36
AT3G28100.1	Thale cress	plasma membrane	54.57	52.41
AT3G28130.2	Thale cress	plasma membrane	54.28	51.83
AT3G28070.1	Thale cress	golgi, plasma membrane, plastid, vacuole	54.57	51.39
AT3G28080.1	Thale cress	golgi, plasma membrane, vacuole	53.69	50.84
AT3G28060.1	Thale cress	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	21.24	46.45
AT3G28050.1	Thale cress	plasma membrane	48.08	44.41
AT5G40230.1	Thale cress	plasma membrane	46.02	42.16
AT4G15540.1	Thale cress	plasma membrane	43.07	42.07
AT5G40240.2	Thale cress	plasma membrane	44.84	39.79
AT1G70260.1	Thale cress	plasma membrane	30.38	27.47
AT1G60050.1	Thale cress	plasma membrane	29.5	26.74

Protein Annotations

MapMan:24.2.1.5	EntrezGene:834019	ProteinID:AED94520.1	EMBL:AF412089	ArrayExpress:AT5G40210	EnsemblPlantsGene:AT5G40210
RefSeq:AT5G40210	TAIR:AT5G40210	RefSeq:AT5G40210-TAIR-G	EnsemblPlants:AT5G40210.1	TAIR:AT5G40210.1	ProteinID:BAB10902.1
EMBL:BT001013	InterPro:EamA_dom	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	RefSeq:NP_568578.1	PFAM:PF00892	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR31218	PANTHER:PTHR31218:SF64	UniProt:Q945L4	SUPFAM:SSF103481
TMHMM:TMhelix	UniParc:UPI00000AC5DA	InterPro:WAT1-related	SEG:seg	:	:

Description

WAT1-related protein At5g40210 [Source:UniProtKB/Swiss-Prot;Acc:Q945L4]

Coordinates

chr5:-:16073534..16076221

Molecular Weight (calculated)

36579.6 Da

IEP (calculated)

9.527

GRAVY (calculated)

0.808

Length

339 amino acids

Sequence
(BLAST)

001: MVHGRLCNRD GWILTAMVVT EFSNVGVNTL VKAATSKGLS PFVVLVYSYT FGSLLLLPLT FFSFRSRSLP PLTFSILCNM GILGLIASAF QILGYNGIKY
101: SSPTLSSAMS NVNPAFTFIL AVVFRMENIS LGKKSSVAKV LGTILSIIGA LVVTLYHGPM LMSSHSDWII GGGLLALQYI LVSVSYLVMA HTMGRYPSAV
201: VVTLVHNVCI AVVCAFVSLL AEKDNPKAWV IRFDITLITV VATGILNSGY YVIHTWAVSH KGPVYLSMFK PLSILIAAVS TFIFLGESLY LGSVMGGILI
301: SIGFYMVLWG KAKEDKVDII GAIESSPSHN APLLDNFKS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.