Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99641 | Canola | plasma membrane | 85.59 | 85.1 |
| Bra030338.1-P | Field mustard | plasma membrane | 85.3 | 84.81 |
| CDY15933 | Canola | plasma membrane | 85.3 | 84.57 |
| CDY38468 | Canola | extracellular | 28.53 | 83.9 |
| AT5G40230.1 | Thale cress | plasma membrane | 76.37 | 71.62 |
| AT5G40240.2 | Thale cress | plasma membrane | 72.33 | 65.71 |
| KRH46524 | Soybean | plasma membrane | 53.03 | 50.14 |
| VIT_14s0066g01640.t01 | Wine grape | plasma membrane | 48.13 | 46.52 |
| AT5G40210.1 | Thale cress | plasma membrane | 42.07 | 43.07 |
| AT3G28130.2 | Thale cress | plasma membrane | 42.94 | 41.97 |
| AT3G28050.1 | Thale cress | plasma membrane | 44.38 | 41.96 |
| AT3G28100.1 | Thale cress | plasma membrane | 41.5 | 40.79 |
| AT3G28070.1 | Thale cress | golgi, plasma membrane, plastid, vacuole | 41.79 | 40.28 |
| AT3G28080.1 | Thale cress | golgi, plasma membrane, vacuole | 40.92 | 39.66 |
| AT3G28060.1 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 14.12 | 31.61 |
| AT1G70260.1 | Thale cress | plasma membrane | 29.97 | 27.73 |
| AT1G60050.1 | Thale cress | plasma membrane | 29.39 | 27.27 |
Protein Annotations
| MapMan:24.2.1.5 | EntrezGene:827227 | ProteinID:AEE83622.1 | EMBL:AK117451 | ProteinID:ANM66068.1 | ArrayExpress:AT4G15540 |
| EnsemblPlantsGene:AT4G15540 | RefSeq:AT4G15540 | TAIR:AT4G15540 | RefSeq:AT4G15540-TAIR-G | EnsemblPlants:AT4G15540.1 | TAIR:AT4G15540.1 |
| EMBL:AY080726 | ProteinID:CAB10332.1 | ProteinID:CAB78596.1 | InterPro:EamA_dom | UniProt:F4JK59 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | RefSeq:NP_001319951.1 | RefSeq:NP_567469.2 |
| PFAM:PF00892 | PO:PO:0000293 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF48 | SUPFAM:SSF103481 | TMHMM:TMhelix |
| UniParc:UPI00017393CE | InterPro:WAT1-related | SEG:seg | : | : | : |
Description
WAT1-related protein At4g15540 [Source:UniProtKB/Swiss-Prot;Acc:F4JK59]
Coordinates
chr4:+:8872698..8875378
Molecular Weight (calculated)
38000.0 Da
IEP (calculated)
8.440
GRAVY (calculated)
0.749
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MREETVSWKY FKRDVVPFTA MIAIECTTVG SSILYKAATL RGFSFYVFVF YAYVGATLVL LLLSLIFGRS RSLPTAKSSL FFKIFLLALL GLTSRVAGCK
101: GIEYSSPTLS SAISNLTPAF TFILAIFFRM EQVMLRSSAT QAKIIGTIVS ISGALVIVLY KGPKLLVAAS FTSFESSWII GGLLLGLQFL LLSVWFILQT
201: HIMEIYPEEI AVVFCYNLCA TLISGTVCLL VEKDLNSWQL KPGFSLASVI YSGLFDTSLG SVIHTWGLHV KGPVYISLFK PLSIAIAVAM AAIFLGDTLH
301: LGSVIGSVIL SFGFYTVIWG KAREDSTKTV SDSEQSLLLP SHDREED
101: GIEYSSPTLS SAISNLTPAF TFILAIFFRM EQVMLRSSAT QAKIIGTIVS ISGALVIVLY KGPKLLVAAS FTSFESSWII GGLLLGLQFL LLSVWFILQT
201: HIMEIYPEEI AVVFCYNLCA TLISGTVCLL VEKDLNSWQL KPGFSLASVI YSGLFDTSLG SVIHTWGLHV KGPVYISLFK PLSIAIAVAM AAIFLGDTLH
301: LGSVIGSVIL SFGFYTVIWG KAREDSTKTV SDSEQSLLLP SHDREED
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.