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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • golgi 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT3G28070.1 Thale cress golgi, plasma membrane, plastid, vacuole 88.39 86.67
AT3G28080.1 Thale cress golgi, plasma membrane, vacuole 84.99 83.8
CDY49754 Canola plasma membrane 79.32 82.11
CDX95070 Canola plasma membrane 52.69 80.17
CDX72470 Canola plasma membrane 52.69 80.17
CDX85185 Canola golgi, plasma membrane, vacuole 79.89 78.77
Bra025321.1-P Field mustard plasma membrane 81.3 76.53
CDX86450 Canola plasma membrane 81.3 76.53
Bra033037.1-P Field mustard golgi, plasma membrane, vacuole 81.59 71.11
AT3G28130.2 Thale cress plasma membrane 69.69 69.3
CDY04006 Canola cytosol, peroxisome, plasma membrane 59.77 59.77
AT5G40210.1 Thale cress plasma membrane 52.41 54.57
AT3G28050.1 Thale cress plasma membrane 50.42 48.5
AT3G28060.1 Thale cress endoplasmic reticulum, mitochondrion, plasma membrane, plastid 18.98 43.23
AT4G15540.1 Thale cress plasma membrane 40.79 41.5
AT5G40230.1 Thale cress plasma membrane 43.34 41.35
AT5G40240.2 Thale cress plasma membrane 43.63 40.31
AT1G60050.1 Thale cress plasma membrane 27.2 25.67
AT1G70260.1 Thale cress plasma membrane 27.2 25.6
Protein Annotations
MapMan:24.2.1.5EntrezGene:822434ProteinID:AEE77403.1ArrayExpress:AT3G28100EnsemblPlantsGene:AT3G28100RefSeq:AT3G28100
TAIR:AT3G28100RefSeq:AT3G28100-TAIR-GEnsemblPlants:AT3G28100.1TAIR:AT3G28100.1ProteinID:BAB01132.1EMBL:BT029535
InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
RefSeq:NP_189449.2PFAM:PF00892PO:PO:0000293PANTHER:PTHR31218PANTHER:PTHR31218:SF64UniProt:Q9LRS5
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI00000A2B5AInterPro:WAT1-relatedSEG:seg:
Description
WAT1-related protein At3g28100 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRS5]
Coordinates
chr3:+:10456029..10461000
Molecular Weight (calculated)
38562.4 Da
IEP (calculated)
10.049
GRAVY (calculated)
0.840
Length
353 amino acids
Sequence
(BLAST)
001: MARTVSLWRR EAVFLTAMLA TETGVVGIST LFKVATSKGL NLYAFLGYSY LLASLLLLPS LFFTDRSRSL PPLSLSILSK IGLLGLLGSM YVITGYIGIE
101: YSSPTLASAI SNITPALTFI LAIIFRMEKV SFKERSSVAK VMGTILSLIG ALVVVLYHGP RVFVASSPPY INFRQLSPPL SSSNSDWLIG GALLTIRDIF
201: VSVSFILQAK IMSTYPAAFT VSFLYIVSVS IVTSMIGLVV EKNNPSVWII RFDITLITIV TMAIITSVYY VIHSWTVRHK GPLYLAIFKP LSILIAVVMS
301: AVFLNDSLYL GCLIGGLLIT LGFYAVMWGK ANEEKDQLLL VSGKERTPLL LNG
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.