Factsheet for VIT_01s0026g00520.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi, vacuole

Predictor Summary:

plastid 1
mitochondrion 2
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plasma membrane, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0026g00490.t01	Wine grape	golgi, plasma membrane, vacuole	63.98	65.09
VIT_01s0026g00360.t01	Wine grape	golgi, plasma membrane	64.83	48.27
KRH74641	Soybean	plasma membrane	30.51	45.0
VIT_01s0026g00550.t01	Wine grape	golgi, plasma membrane	37.71	35.18
KRH69519	Soybean	golgi, plasma membrane, vacuole	49.15	33.24
PGSC0003DMT400010535	Potato	plasma membrane	43.64	32.8
VIT_17s0000g07910.t01	Wine grape	golgi, plasma membrane	44.07	32.0
KRH74638	Soybean	golgi, plasma membrane, plastid	47.46	31.73
KRH69515	Soybean	golgi, plasma membrane, plastid	47.03	31.27
VIT_01s0026g00540.t01	Wine grape	golgi, plasma membrane	47.03	31.18
Solyc05g005830.2.1	Tomato	plasma membrane	44.49	30.0
VIT_01s0026g00530.t01	Wine grape	golgi, plasma membrane	43.64	29.77
VIT_14s0066g01650.t01	Wine grape	golgi, plasma membrane, vacuole	43.22	28.33
VIT_14s0066g01640.t01	Wine grape	plasma membrane	41.53	27.3
VIT_17s0000g07930.t01	Wine grape	plasma membrane	35.59	24.85
KRH74640	Soybean	plasma membrane	16.53	20.31
VIT_01s0026g00500.t01	Wine grape	extracellular, golgi, vacuole	3.81	5.96

Protein Annotations

EntrezGene:100253486	wikigene:100253486	MapMan:24.2.1.5	ProteinID:CCB56640	ProteinID:CCB56640.1	InterPro:EamA_dom
UniProt:F6HPL2	EMBL:FN596002	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	EntrezGene:LOC100253486	wikigene:LOC100253486	PFAM:PF00892	PANTHER:PTHR31218	PANTHER:PTHR31218:SF42
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0002108B31	ArrayExpress:VIT_01s0026g00520	EnsemblPlantsGene:VIT_01s0026g00520	EnsemblPlants:VIT_01s0026g00520.t01
unigene:Vvi.17821	InterPro:WAT1-related	RefSeq:XP_002266639	RefSeq:XP_002266639.1	:	:

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F6HPL2]

Coordinates

chr1:+:9284609..9285768

Molecular Weight (calculated)

25589.9 Da

IEP (calculated)

9.483

GRAVY (calculated)

0.631

Length

236 amino acids

Sequence
(BLAST)

001: MVTRMENLDL RVRSSRAKSI GTIMSITGAL TMTMYEGPPV AFTSLTSTKL NGNVTLPQSN WVIGGILSAI AAFMLAVLFV FQTSIIRAYP AELMVTLICC
101: TFVAMQSSIV SLMAERNPSA WRLRPDIELI AIVYSAVLVV GLRSVASAWV MRRKGPFFAA MFKPVGIIIA VVMGVTFLGD TLYLGSVVGA AIIAIGFYTV
201: MWGKDKEETL LEDVPAHGME SSSHNVPLLQ NKTFQA

Best Arabidopsis Sequence Match ( AT3G28050.1 )
(BLAST)

001: MARKYFQREV LPVTALVIME CANVGLNTLF KAATLKGMSF HVFIVYSYGL AALLLLPSLF CSFRSRTLPP MNFSILYKIV LLGIIGCCSN IMGYTGINYS
101: SPTLASAISN LTPAFTFLLA VVFRMESVSF KRTSSVAKML GTVVSIGGAF IVTLYNGPVV IAKSPPSVSL RSQSTNPNWI LGAGFLAVEY FCVPLWYIVQ
201: TQIMREYPAE FTVVCFYSIG VSFWTALVTL FTEGNDLGAW KIKPNIALVS IVCSGLFGSC INNTIHTWAL RIKGPLFVAM FKPLSIAIAV AMGVIFLRDS
301: LYIGSLIGAT VITIGFYTVM WGKAKEVALV EDDNKANHEE ANEADLDSPS GSQKAPLLES YKNDEHV

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178VL75]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.