Factsheet for VIT_17s0000g07910.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g07930.t01	Wine grape	plasma membrane	62.77	60.35
KRH57038	Soybean	extracellular, golgi, mitochondrion, plastid	34.77	51.36
KRH03335	Soybean	plasma membrane	36.0	46.8
VIT_01s0026g00360.t01	Wine grape	golgi, plasma membrane	44.31	45.43
KRH03336	Soybean	endoplasmic reticulum, plasma membrane	51.69	45.28
VIT_01s0026g00530.t01	Wine grape	golgi, plasma membrane	47.69	44.8
VIT_01s0026g00490.t01	Wine grape	golgi, plasma membrane, vacuole	31.69	44.4
VIT_01s0026g00520.t01	Wine grape	golgi, mitochondrion, plasma membrane, vacuole	32.0	44.07
VIT_01s0026g00540.t01	Wine grape	golgi, plasma membrane	47.69	43.54
VIT_14s0066g01650.t01	Wine grape	golgi, plasma membrane, vacuole	47.08	42.5
KRH57037	Soybean	plasma membrane	49.23	42.44
VIT_01s0026g00550.t01	Wine grape	golgi, plasma membrane	32.62	41.9
VIT_14s0066g01640.t01	Wine grape	plasma membrane	44.62	40.39
VIT_01s0026g00500.t01	Wine grape	extracellular, golgi, vacuole	15.69	33.77

Protein Annotations

EntrezGene:100258662	wikigene:100258662	MapMan:24.2.1.5	ProteinID:CBI15069	ProteinID:CBI15069.3	UniProt:D7SHV9
InterPro:EamA_dom	EMBL:FN594950	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	EntrezGene:LOC100258662	wikigene:LOC100258662	PFAM:PF00892	PANTHER:PTHR31218	PANTHER:PTHR31218:SF47
SUPFAM:SSF103481	TIGR:TC63521	TIGR:TC66688	TIGR:TC69301	TMHMM:TMhelix	UniParc:UPI0001BE0AA8
ArrayExpress:VIT_17s0000g07910	EnsemblPlantsGene:VIT_17s0000g07910	EnsemblPlants:VIT_17s0000g07910.t01	unigene:Vvi.11936	InterPro:WAT1-related	RefSeq:XP_002283377
RefSeq:XP_002283377.1	SEG:seg	:	:	:	:

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:D7SHV9]

Coordinates

chr17:-:8880212..8883098

Molecular Weight (calculated)

35369.8 Da

IEP (calculated)

9.739

GRAVY (calculated)

0.672

Length

325 amino acids

Sequence
(BLAST)

001: MDRFVFVVYS NAFASLILFS ISFIFLRTKR PPLSFSLLCK FFLLSLAGIT VMQNCVFTGV SYGSPTLGSA MSNLIPAFTF LLAVAFRLEN LDLRSSRSLI
101: KILGTLVSIS GALIVTLYKG PPIGAGLIKS PSISSNDHLQ KTANNWVIGG LFFAMAGLSI SVWNIFQAPI LRRYPSEITI VSFFTLFGAI QCAAVALIAV
201: KDSNAWKLRP DFELITIIYS AVFGGVVSFC VQTWCIKRKG PVFVAIFKPL GIGIAAIMGV IFLGDTLYIG SVIGAIIIVT GFYGVMWAQT KEGEKGEAQE
301: VDGLPSTSEK APLLQSRRDE QKWLD

Best Arabidopsis Sequence Match ( AT3G28050.1 )
(BLAST)

001: MARKYFQREV LPVTALVIME CANVGLNTLF KAATLKGMSF HVFIVYSYGL AALLLLPSLF CSFRSRTLPP MNFSILYKIV LLGIIGCCSN IMGYTGINYS
101: SPTLASAISN LTPAFTFLLA VVFRMESVSF KRTSSVAKML GTVVSIGGAF IVTLYNGPVV IAKSPPSVSL RSQSTNPNWI LGAGFLAVEY FCVPLWYIVQ
201: TQIMREYPAE FTVVCFYSIG VSFWTALVTL FTEGNDLGAW KIKPNIALVS IVCSGLFGSC INNTIHTWAL RIKGPLFVAM FKPLSIAIAV AMGVIFLRDS
301: LYIGSLIGAT VITIGFYTVM WGKAKEVALV EDDNKANHEE ANEADLDSPS GSQKAPLLES YKNDEHV

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178VL75]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.