Factsheet for VIT_01s0026g00530.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

nucleus 1
plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0026g00540.t01	Wine grape	golgi, plasma membrane	56.36	54.78
VIT_01s0026g00360.t01	Wine grape	golgi, plasma membrane	47.69	52.05
Solyc05g005840.2.1	Tomato	plasma membrane	51.73	51.88
PGSC0003DMT400010538	Potato	plasma membrane	50.87	51.01
KRH69514	Soybean	plasma membrane	51.73	51.0
KRH74643	Soybean	plasma membrane	49.71	49.57
VIT_17s0000g07910.t01	Wine grape	golgi, plasma membrane	44.8	47.69
KRH74642	Soybean	plasma membrane	36.71	47.04
VIT_01s0026g00500.t01	Wine grape	extracellular, golgi, vacuole	20.52	47.02
VIT_01s0026g00490.t01	Wine grape	golgi, plasma membrane, vacuole	30.92	46.12
VIT_01s0026g00520.t01	Wine grape	golgi, mitochondrion, plasma membrane, vacuole	29.77	43.64
VIT_14s0066g01650.t01	Wine grape	golgi, plasma membrane, vacuole	44.51	42.78
VIT_14s0066g01640.t01	Wine grape	plasma membrane	43.06	41.5
VIT_17s0000g07930.t01	Wine grape	plasma membrane	40.46	41.42
VIT_01s0026g00550.t01	Wine grape	golgi, plasma membrane	29.19	39.92

Protein Annotations

EntrezGene:100262193	wikigene:100262193	MapMan:24.2.1.5	ProteinID:CBI32108	ProteinID:CBI32108.3	UniProt:D7TNN5
InterPro:EamA_dom	EMBL:FN596002	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	EntrezGene:LOC100262193	wikigene:LOC100262193	PFAM:PF00892	PANTHER:PTHR31218	PANTHER:PTHR31218:SF71
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0001982A10	ArrayExpress:VIT_01s0026g00530	EnsemblPlantsGene:VIT_01s0026g00530	EnsemblPlants:VIT_01s0026g00530.t01
InterPro:WAT1-related	RefSeq:XP_002266139	RefSeq:XP_002266139.1	SEG:seg	:	:

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:D7TNN5]

Coordinates

chr1:+:9295425..9299506

Molecular Weight (calculated)

37577.2 Da

IEP (calculated)

9.434

GRAVY (calculated)

0.898

Length

346 amino acids

Sequence
(BLAST)

001: MGVMGTVSLP FLGMVIVVFT QVTNMIVSKM AMSNGLSSFV LVLYSNAISA VILLPLSLLF HRSPRPPLTF SILCRFFLLA LIGCFAQIFG YAGVQYSSPT
101: LGSAMLNLVP AFTFILAVIC RMEKLELKKS SSLAKSVGAL VSVAGAFVVT FYKGPPIMFS SSFSDSSNQI FSSQSHWVLG GFLLADESLL ASMWYILQAT
201: ILKKHPAVLT ITFFYCFFIS IISLAISLVA ERDPSAWRLK LDVGLLAVLY SAIVGNVIRI SMCTWCVRRA GPLFCSMFKP LGIVFAFVMG VIFSGDALHL
301: GSLVGAIIIV TGFYAVMWGK AKEAEEGRLE CSRKVPLLQN QTDVSV

Best Arabidopsis Sequence Match ( AT5G40240.3 )
(BLAST)

001: MREAGEEKVA WKYFTRDVVP FAAMFAVECA TVGSNTLFKA ATLRGLSFYV FVFYSYIVST LLLLPLSVIF GRSRRLPAAK SPLFFKIFLL GLVGFMSQIA
101: GCKGIAYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SATQAKIIGA ILSISGALVV VLYKGPQVLA SASFTTVLPT VTLHQQLTSI ESSWIIGGLL
201: LASQYFLISV WYILQTRVME VYPEEITVVF FYNLFATLIS VPVCLFAESN LTSWVLKPDI SLAAIIYSGV FVSLFSALTH TWGLHLKGPV YISLFRPLSI
301: AIAVAMGAIF LGDALHLGSV IGSMILCIGF YTVIWGKARE DTIKTVAGSE QSPLLLTHII EDGAFPLS

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F4KHA9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.