Factsheet for PGSC0003DMT400010538

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g005840.2.1	Tomato	plasma membrane	92.17	92.17
VIT_01s0026g00530.t01	Wine grape	golgi, plasma membrane	51.01	50.87
KRH69514	Soybean	plasma membrane	45.8	45.01
KRH74642	Soybean	plasma membrane	34.78	44.44
PGSC0003DMT400010543	Potato	plasma membrane, plastid	44.64	44.13
KRH74643	Soybean	plasma membrane	43.19	42.94
PGSC0003DMT400010539	Potato	plasma membrane	40.87	40.75
PGSC0003DMT400010535	Potato	plasma membrane	30.72	33.76
PGSC0003DMT400061666	Potato	plasma membrane	32.75	30.79
PGSC0003DMT400097482	Potato	extracellular, plasma membrane, plastid	16.81	30.05

Protein Annotations

EntrezGene:102583649	MapMan:24.2.1.5	InterPro:EamA_dom	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
UniProt:M0ZY76	PFAM:PF00892	EnsemblPlantsGene:PGSC0003DMG400004119	PGSC:PGSC0003DMG400004119	EnsemblPlants:PGSC0003DMT400010538	PANTHER:PTHR31218
PANTHER:PTHR31218:SF71	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI00029530BF	InterPro:WAT1-related	RefSeq:XP_006355963.1
SEG:seg	:	:	:	:	:

Description

Auxin-induced protein 5NG4 [Source:PGSC_GENE;Acc:PGSC0003DMG400004119]

Coordinates

chr5:-:7572151..7576843

Molecular Weight (calculated)

38749.5 Da

IEP (calculated)

9.231

GRAVY (calculated)

0.806

Length

345 amino acids

Sequence
(BLAST)

001: MKGSSWKEML MPSVGMIFAI IAIVISMIIS KIAMSKGLSS FIIVVYSNAI ATLILFPPSI FIFITRSRRR PLTFSVFWRI LLLALIGYFG QICDYVGISY
101: SSPTLATAML NLIPGFTFIL AITFRMEVIN WKSWSSYAKV FGTFVLIGGA FVLTFYKGPP IINQHLTSTF SSQQNWILGG VILACESMSA SLWYIIQASI
201: LKIYQEEMII VCLYSFFVTI ISALISLLVE RNPNAWMIYP DIRLIAILYS GIVGIAFRSC MTTWCLKKTD PLFVSMFKPF AIVFALLIGT FCFRDVFYLG
301: SLVGSVTTVI GFYGVMWGKT QEKYYEGNNL ETLAENNVPL LQNEA

Best Arabidopsis Sequence Match ( AT3G28050.1 )
(BLAST)

001: MARKYFQREV LPVTALVIME CANVGLNTLF KAATLKGMSF HVFIVYSYGL AALLLLPSLF CSFRSRTLPP MNFSILYKIV LLGIIGCCSN IMGYTGINYS
101: SPTLASAISN LTPAFTFLLA VVFRMESVSF KRTSSVAKML GTVVSIGGAF IVTLYNGPVV IAKSPPSVSL RSQSTNPNWI LGAGFLAVEY FCVPLWYIVQ
201: TQIMREYPAE FTVVCFYSIG VSFWTALVTL FTEGNDLGAW KIKPNIALVS IVCSGLFGSC INNTIHTWAL RIKGPLFVAM FKPLSIAIAV AMGVIFLRDS
301: LYIGSLIGAT VITIGFYTVM WGKAKEVALV EDDNKANHEE ANEADLDSPS GSQKAPLLES YKNDEHV

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178VL75]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.