Factsheet for PGSC0003DMT400010535

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g005830.2.1	Tomato	plasma membrane	94.59	84.86
VIT_01s0026g00490.t01	Wine grape	golgi, plasma membrane, vacuole	36.62	49.57
KRH69519	Soybean	golgi, plasma membrane, vacuole	49.68	44.7
VIT_01s0026g00520.t01	Wine grape	golgi, mitochondrion, plasma membrane, vacuole	32.8	43.64
KRH74641	Soybean	plasma membrane	20.7	40.62
KRH63359	Soybean	extracellular, plasma membrane, vacuole	10.83	39.53
KRH74638	Soybean	golgi, plasma membrane, plastid	43.63	38.81
KRH26178	Soybean	plasma membrane	20.7	37.79
KRH69515	Soybean	golgi, plasma membrane, plastid	42.04	37.18
KRH74640	Soybean	plasma membrane	21.97	35.94
KRH64529	Soybean	endoplasmic reticulum, plasma membrane, vacuole	39.81	35.71
KRH53406	Soybean	golgi, plasma membrane, vacuole	38.85	34.86
KRH04697	Soybean	plasma membrane, vacuole	29.94	34.43
KRH64531	Soybean	golgi, plasma membrane, vacuole	37.9	33.9
KRH00038	Soybean	endoplasmic reticulum, plasma membrane, vacuole	35.67	33.63
KRG90314	Soybean	extracellular, plasma membrane, vacuole	9.55	32.61
KRH15684	Soybean	extracellular, plasma membrane, vacuole	9.55	32.61
KRH54612	Soybean	extracellular, plasma membrane, vacuole	9.55	32.61
PGSC0003DMT400010543	Potato	plasma membrane, plastid	35.35	31.81
PGSC0003DMT400010539	Potato	plasma membrane	34.39	31.21
PGSC0003DMT400097482	Potato	extracellular, plasma membrane, plastid	19.11	31.09
PGSC0003DMT400010538	Potato	plasma membrane	33.76	30.72
KRH71873	Soybean	extracellular, plasma membrane, vacuole	8.92	30.43
PGSC0003DMT400061666	Potato	plasma membrane	33.44	28.61
KRH37955	Soybean	cytosol, nucleus, peroxisome	16.88	28.19

Protein Annotations

EnsemblPlants:PGSC0003DMT400010535	EnsemblPlantsGene:PGSC0003DMG400004118	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:EamA_dom
InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF135	PFAM:PF00892	PGSC:PGSC0003DMG400004118	SEG:seg
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0002951EE1	UniProt:M0ZY74	MapMan:24.2.1.5	:

Description

Auxin-induced protein 5NG4 [Source:PGSC_GENE;Acc:PGSC0003DMG400004118]

Coordinates

chr5:-:7577951..7581368

Molecular Weight (calculated)

34486.4 Da

IEP (calculated)

8.709

GRAVY (calculated)

0.847

Length

314 amino acids

Sequence
(BLAST)

001: MWSSRVVIIT MLIILECIEV GLNTLNKAAT TRGMSNFVFI FYANALALFF LVPSTFIYHS NPILASAMTD VVPAFTFLIA VIAGMEKLGL RLKSSLAKFI
101: GTTILILGAL LMTFYRGPPI FSNQSITPSN NFHQLHISTK SNWILGGFLL ATANLLLAIL YIVQAWTIND YPEEFVVTTV TCGLVTIISG VVGLIAEQNL
201: SSWRLKPDLE LITVCYAAIL MIVLRSLVFI WALKKKGPVF VVMIKPLGMI AAVIMGVIFL GDVLHVGNII GGMIIALGFY CVMWGKAEEE MCVKDISKDS
301: TRVSLLHRQS DNNA

Best Arabidopsis Sequence Match ( AT5G40240.3 )
(BLAST)

001: MREAGEEKVA WKYFTRDVVP FAAMFAVECA TVGSNTLFKA ATLRGLSFYV FVFYSYIVST LLLLPLSVIF GRSRRLPAAK SPLFFKIFLL GLVGFMSQIA
101: GCKGIAYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SATQAKIIGA ILSISGALVV VLYKGPQVLA SASFTTVLPT VTLHQQLTSI ESSWIIGGLL
201: LASQYFLISV WYILQTRVME VYPEEITVVF FYNLFATLIS VPVCLFAESN LTSWVLKPDI SLAAIIYSGV FVSLFSALTH TWGLHLKGPV YISLFRPLSI
301: AIAVAMGAIF LGDALHLGSV IGSMILCIGF YTVIWGKARE DTIKTVAGSE QSPLLLTHII EDGAFPLS

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F4KHA9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.