Factsheet for VIT_01s0026g00490.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

plastid 1
peroxisome 1
mitochondrion 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	peroxisome
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0026g00520.t01	Wine grape	golgi, mitochondrion, plasma membrane, vacuole	65.09	63.98
KRH63359	Soybean	extracellular, plasma membrane, vacuole	19.4	52.33
VIT_01s0026g00360.t01	Wine grape	golgi, plasma membrane	70.26	51.42
KRH26178	Soybean	plasma membrane	34.91	47.09
KRG90314	Soybean	extracellular, plasma membrane, vacuole	15.52	39.13
KRH15684	Soybean	extracellular, plasma membrane, vacuole	15.52	39.13
KRH54612	Soybean	extracellular, plasma membrane, vacuole	15.09	38.04
KRH71873	Soybean	extracellular, plasma membrane, vacuole	14.66	36.96
PGSC0003DMT400010535	Potato	plasma membrane	49.57	36.62
VIT_01s0026g00550.t01	Wine grape	golgi, plasma membrane	39.22	35.97
KRH04697	Soybean	plasma membrane, vacuole	42.24	35.9
KRH37955	Soybean	cytosol, nucleus, peroxisome	27.16	33.51
Solyc05g005830.2.1	Tomato	plasma membrane	50.0	33.14
VIT_01s0026g00540.t01	Wine grape	golgi, plasma membrane	48.71	31.74
VIT_17s0000g07910.t01	Wine grape	golgi, plasma membrane	44.4	31.69
KRH64529	Soybean	endoplasmic reticulum, plasma membrane, vacuole	46.98	31.14
VIT_01s0026g00530.t01	Wine grape	golgi, plasma membrane	46.12	30.92
KRH53406	Soybean	golgi, plasma membrane, vacuole	46.55	30.86
KRH64531	Soybean	golgi, plasma membrane, vacuole	46.55	30.77
KRH00038	Soybean	endoplasmic reticulum, plasma membrane, vacuole	41.81	29.13
VIT_14s0066g01640.t01	Wine grape	plasma membrane	42.24	27.3
VIT_14s0066g01650.t01	Wine grape	golgi, plasma membrane, vacuole	42.24	27.22
VIT_17s0000g07930.t01	Wine grape	plasma membrane	35.34	24.26
VIT_01s0026g00500.t01	Wine grape	extracellular, golgi, vacuole	3.45	5.3

Protein Annotations

MapMan:24.2.1.5	EMBL:AM458084	ProteinID:CAN67884	ProteinID:CAN67884.1	ProteinID:CCB56642	ProteinID:CCB56642.1
InterPro:EamA_dom	UniProt:F6HPL4	EMBL:FN596002	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	PFAM:PF00892	PANTHER:PTHR31218	PANTHER:PTHR31218:SF42	SUPFAM:SSF103481
TMHMM:TMhelix	UniParc:UPI0002108B33	ArrayExpress:VIT_01s0026g00490	EnsemblPlantsGene:VIT_01s0026g00490	EnsemblPlants:VIT_01s0026g00490.t01	InterPro:WAT1-related
RefSeq:XP_002266096	RefSeq:XP_002266096.1	SEG:seg	:	:	:

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F6HPL4]

Coordinates

chr1:+:9242360..9243555

Molecular Weight (calculated)

24944.2 Da

IEP (calculated)

9.673

GRAVY (calculated)

0.686

Length

232 amino acids

Sequence
(BLAST)

001: MEKLDLKVKS SRAKCLGTLV SVAGALLITI YKGPGIEFAS TTPSMLNHNL LLPRSNWIIG GFLTAAAAFM VAVLLVFQTS IIRDYPAELI VTLISHIFAT
101: MQSSLVSLIA ERDPSAWRLR LDMELIAVGY SGIFVVALRG AVYAWVLHQK GPVFVAMFKP AGIVIAVIMG VTFLGDKLHL GSVIGAAIIA LGFYTVVWGK
201: AKEEKMAEDI AACGVNTSSH RVPLLQNKST EV

Best Arabidopsis Sequence Match ( AT3G28050.1 )
(BLAST)

001: MARKYFQREV LPVTALVIME CANVGLNTLF KAATLKGMSF HVFIVYSYGL AALLLLPSLF CSFRSRTLPP MNFSILYKIV LLGIIGCCSN IMGYTGINYS
101: SPTLASAISN LTPAFTFLLA VVFRMESVSF KRTSSVAKML GTVVSIGGAF IVTLYNGPVV IAKSPPSVSL RSQSTNPNWI LGAGFLAVEY FCVPLWYIVQ
201: TQIMREYPAE FTVVCFYSIG VSFWTALVTL FTEGNDLGAW KIKPNIALVS IVCSGLFGSC INNTIHTWAL RIKGPLFVAM FKPLSIAIAV AMGVIFLRDS
301: LYIGSLIGAT VITIGFYTVM WGKAKEVALV EDDNKANHEE ANEADLDSPS GSQKAPLLES YKNDEHV

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178VL75]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.