Factsheet for VIT_17s0000g07930.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g07910.t01	Wine grape	golgi, plasma membrane	60.35	62.77
KRH03336	Soybean	endoplasmic reticulum, plasma membrane	51.78	47.17
KRH03335	Soybean	plasma membrane	33.73	45.6
KRH57037	Soybean	plasma membrane	49.11	44.03
KRH57038	Soybean	extracellular, golgi, mitochondrion, plastid	27.81	42.73
VIT_01s0026g00530.t01	Wine grape	golgi, plasma membrane	41.42	40.46
VIT_01s0026g00540.t01	Wine grape	golgi, plasma membrane	42.6	40.45
VIT_01s0026g00500.t01	Wine grape	extracellular, golgi, vacuole	17.75	39.74
VIT_01s0026g00360.t01	Wine grape	golgi, plasma membrane	35.21	37.54
VIT_14s0066g01650.t01	Wine grape	golgi, plasma membrane, vacuole	39.94	37.5
VIT_14s0066g01640.t01	Wine grape	plasma membrane	38.17	35.93
VIT_01s0026g00520.t01	Wine grape	golgi, mitochondrion, plasma membrane, vacuole	24.85	35.59
VIT_01s0026g00490.t01	Wine grape	golgi, plasma membrane, vacuole	24.26	35.34
VIT_01s0026g00550.t01	Wine grape	golgi, plasma membrane	25.74	34.39

Protein Annotations

MapMan:24.2.1.5	ProteinID:CBI15067	ProteinID:CBI15067.3	UniProt:D7SHV7	InterPro:EamA_dom	EMBL:FN594950
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	PFAM:PF00892
PANTHER:PTHR31218	PANTHER:PTHR31218:SF47	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0001BE0AA6	ArrayExpress:VIT_17s0000g07930
EnsemblPlantsGene:VIT_17s0000g07930	EnsemblPlants:VIT_17s0000g07930.t01	InterPro:WAT1-related	SEG:seg	:	:

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:D7SHV7]

Coordinates

chr17:-:8903187..8905249

Molecular Weight (calculated)

37350.3 Da

IEP (calculated)

7.636

GRAVY (calculated)

0.692

Length

338 amino acids

Sequence
(BLAST)

001: MGMKAWLSGI VPIAAMVMME CLDVGLVTLS KAAMSRGMNH FVFVVYYNAL ASLIFFLLSF IFHRTKRPPL TFSHFCKFFL LGLPGITVMQ NWVFTGVSYS
101: SPTLCYAMSN LIPAFTFLLA VAIRLEDLDL RSSRSQIKLL DNWVIGGLFF AAACLSLSAW NTCQAPILSS CYPSNITVIS FITLFGAIQS TAVSLIAVRD
201: SNAWKLRPDI ELISIIYSAI IGVVAFFVQN WCIRRKGPVF ASMFKPLGMG IAAIIGVIFL GETLHIGSVI GAIIIATGCY VVAWLQYREE EESKVCEVVM
301: LPSTFEKAPM LDEPEGSMSQ FDGFHCGYKE YNPVYSVT

Best Arabidopsis Sequence Match ( AT3G28050.1 )
(BLAST)

001: MARKYFQREV LPVTALVIME CANVGLNTLF KAATLKGMSF HVFIVYSYGL AALLLLPSLF CSFRSRTLPP MNFSILYKIV LLGIIGCCSN IMGYTGINYS
101: SPTLASAISN LTPAFTFLLA VVFRMESVSF KRTSSVAKML GTVVSIGGAF IVTLYNGPVV IAKSPPSVSL RSQSTNPNWI LGAGFLAVEY FCVPLWYIVQ
201: TQIMREYPAE FTVVCFYSIG VSFWTALVTL FTEGNDLGAW KIKPNIALVS IVCSGLFGSC INNTIHTWAL RIKGPLFVAM FKPLSIAIAV AMGVIFLRDS
301: LYIGSLIGAT VITIGFYTVM WGKAKEVALV EDDNKANHEE ANEADLDSPS GSQKAPLLES YKNDEHV

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178VL75]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.