Factsheet for VIT_01s0026g00360.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0026g00490.t01	Wine grape	golgi, plasma membrane, vacuole	51.42	70.26
VIT_01s0026g00520.t01	Wine grape	golgi, mitochondrion, plasma membrane, vacuole	48.27	64.83
VIT_01s0026g00500.t01	Wine grape	extracellular, golgi, vacuole	24.92	52.32
VIT_01s0026g00530.t01	Wine grape	golgi, plasma membrane	52.05	47.69
VIT_01s0026g00540.t01	Wine grape	golgi, plasma membrane	52.37	46.63
VIT_17s0000g07910.t01	Wine grape	golgi, plasma membrane	45.43	44.31
VIT_14s0066g01650.t01	Wine grape	golgi, plasma membrane, vacuole	46.37	40.83
VIT_14s0066g01640.t01	Wine grape	plasma membrane	45.43	40.11
VIT_01s0026g00550.t01	Wine grape	golgi, plasma membrane	30.6	38.34
VIT_17s0000g07930.t01	Wine grape	plasma membrane	37.54	35.21

Protein Annotations

EntrezGene:100244951	wikigene:100244951	MapMan:24.2.1.5	ProteinID:CBI32117	ProteinID:CBI32117.3	UniProt:D7TNP4
InterPro:EamA_dom	EMBL:FN596002	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	EntrezGene:LOC100244951	wikigene:LOC100244951	PFAM:PF00892	PANTHER:PTHR31218	PANTHER:PTHR31218:SF42
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0001BE3D7A	ArrayExpress:VIT_01s0026g00360	EnsemblPlantsGene:VIT_01s0026g00360	EnsemblPlants:VIT_01s0026g00360.t01
unigene:Vvi.9692	InterPro:WAT1-related	RefSeq:XP_002265468	RefSeq:XP_002265468.2	SEG:seg	:

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:D7TNP4]

Coordinates

chr1:+:9117703..9120234

Molecular Weight (calculated)

34734.4 Da

IEP (calculated)

8.856

GRAVY (calculated)

0.815

Length

317 amino acids

Sequence
(BLAST)

001: MSDFVFVVYS NALSVPILLF CCLLFHRRRF PPPLTLSILC RIFILGFISC STQMFLFVGI RYSSPTLASA MTDLVPAFTF ILAIISRMEK LDLKAGSCRA
101: KCIGTIVSII GALIVTIYKG PQIAFASSTF KILDENLRSQ ISNWVIGGFL LAISAVSIAL FYVVQTSIIR DYPAELMLTF ICHIFVTMQS SIVSLIAERD
201: PSAWRLKPDV ELIAVGYSAV LVLAFRGTAH AWVLHKKGPV FVAMFKPVAI VIAVVMGVTF LGDVLHLGSV IGAAIIAFGF YTVMWGKAKE EIEDMTTSGI
301: DSSSHKDPLL QNKSTQV

Best Arabidopsis Sequence Match ( AT5G40240.3 )
(BLAST)

001: MREAGEEKVA WKYFTRDVVP FAAMFAVECA TVGSNTLFKA ATLRGLSFYV FVFYSYIVST LLLLPLSVIF GRSRRLPAAK SPLFFKIFLL GLVGFMSQIA
101: GCKGIAYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SATQAKIIGA ILSISGALVV VLYKGPQVLA SASFTTVLPT VTLHQQLTSI ESSWIIGGLL
201: LASQYFLISV WYILQTRVME VYPEEITVVF FYNLFATLIS VPVCLFAESN LTSWVLKPDI SLAAIIYSGV FVSLFSALTH TWGLHLKGPV YISLFRPLSI
301: AIAVAMGAIF LGDALHLGSV IGSMILCIGF YTVIWGKARE DTIKTVAGSE QSPLLLTHII EDGAFPLS

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F4KHA9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.