Factsheet for Bra033308.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89990	Canola	nucleus	100.0	100.0
CDY15225	Canola	nucleus	75.76	75.19
Bra033303.1-P	Field mustard	nucleus	70.45	72.66
Bra033302.1-P	Field mustard	nucleus	31.06	47.31
Bra033300.1-P	Field mustard	nucleus	54.55	47.06
Bra033299.1-P	Field mustard	nucleus	29.29	46.22
AT1G02250.1	Thale cress	nucleus	41.92	45.86
Bra032615.1-P	Field mustard	nucleus	25.76	45.54
AT1G02230.1	Thale cress	nucleus	40.4	44.57
Bra033305.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	30.3	42.55
Bra033298.1-P	Field mustard	nucleus	39.65	41.98
Bra010895.1-P	Field mustard	nucleus	12.88	41.46
AT3G04420.1	Thale cress	nucleus	35.61	41.23
AT1G02220.1	Thale cress	nucleus	37.12	37.31
Bra033306.1-P	Field mustard	nucleus	31.82	32.81
Bra027596.1-P	Field mustard	nucleus	19.95	32.64
Bra036328.1-P	Field mustard	nucleus	17.68	24.31
Bra036326.1-P	Field mustard	nucleus	21.21	22.7
Bra036327.1-P	Field mustard	cytosol	23.48	21.88
Bra033297.1-P	Field mustard	nucleus	12.37	21.78
Bra008553.1-P	Field mustard	cytosol, nucleus, plasma membrane	23.99	21.44
KRH06324	Soybean	cytosol	13.89	20.6
KRH47750	Soybean	cytosol	14.9	19.16
Bra033296.1-P	Field mustard	nucleus	22.47	18.74
Os06t0101800-01	Rice	nucleus	16.67	18.38
KRH47748	Soybean	cytosol	18.43	18.02
KRH06327	Soybean	cytosol	17.17	17.0
KRH06326	Soybean	nucleus	18.43	16.94
HORVU7Hr1G000910.1	Barley	nucleus	18.43	13.77
TraesCS4A01G499900.1	Wheat	plastid	19.19	13.19
TraesCS7A01G000300.1	Wheat	nucleus	17.17	12.88
TraesCS7D01G000200.1	Wheat	plastid	16.67	11.76
KRH47747	Soybean	nucleus	14.65	11.67
EER87676	Sorghum	plastid	18.69	11.47
Zm00001d045617_P001	Maize	nucleus, plasma membrane, vacuole	16.67	10.8

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra033308	EnsemblPlants:Bra033308.1	EnsemblPlants:Bra033308.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4EWX3	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF58	SUPFAM:SSF101941
UniParc:UPI0002544F6D	SEG:seg	:	:	:	:

Description

AT1G02230 (E=8e-069) ANAC004 | ANAC004 (Arabidopsis NAC domain containing protein 4); transcription factor

Coordinates

chrA10:+:4346413..4348039

Molecular Weight (calculated)

44855.4 Da

IEP (calculated)

5.660

GRAVY (calculated)

-0.783

Length

396 amino acids

Sequence
(BLAST)

001: MVDPPVGYRF HPTDEEIVGD YVRPKNIESN TSRVDEVMNT VDIYEFDPWE LPYKSRINST DEVWYFFGCK KDQQNRGERQ SRRTKSGFWK KTGVTMDIMR
101: KRGNREKIGE KRVFVFQYSK ILGGPSKPKS DWVMHEHVAT FLSPDSPNQT MMMMKYTVCK VMFKGDERVL SSSSSSSAGQ IQHHHLSLIP HVNSNNSGGL
201: SSETEVDPRQ FTGFPHLEEE TMFVDEILRG FNNPPTDDWN SLFSNDEEQG NTMFMQEDRN DYRPKMSLTG VFIGHSDDDS DSDSISSRTT TGSIKTSSTC
301: VTFGCSNHPT DLSESPSSST IESGSVTQEV SEALGTNTVT SERKMNPCDD DAQLSEIGGD KIDQEMVIKN KRAGYIYRMM QKITKKIKLR SCISGT

Best Arabidopsis Sequence Match ( AT1G02250.1 )
(BLAST)

001: MANPVGFRFR PTDGEIVDIY LRPKNLESNT SHVDEVISTV DICSFDPWDL PSHSRMKTRD QVWYFFGRKE NKYGKGDRQI RKTKSGFWKK TGVTMDIMRK
101: TGDREKIGEK RVLVFKNHGG SKSDWAMHEY HATFSSPNQI MTYTLCKVKF KGERREFSVA TGSGIKHTHS LIPPTNNSGV LSVETEGSLF HSQESQNPSQ
201: FSGFLDVDAL DRDFCNILSD DFKGFFNDDD EQSKIVSMQD DRNNHTPQKP LTGVFSDHST DGSDSDPISA TTISIQTLST CPSFGSSNPL YQITDLQESP
301: NSIKLVSLAQ EVSKTPGTGI DNDAQGTEIG EHKLGQETIK NKRAGFFHRM IQKFVKKIHL RT

Arabidopsis Description

NAC005NAC domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:O81914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.