Factsheet for Bra033303.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033308.1-P	Field mustard	nucleus	72.66	70.45
Bra033300.1-P	Field mustard	nucleus	65.62	54.9
Bra033302.1-P	Field mustard	nucleus	32.81	48.46
Bra032615.1-P	Field mustard	nucleus	26.3	45.09
Bra033299.1-P	Field mustard	nucleus	29.43	45.02
Bra033298.1-P	Field mustard	nucleus	42.97	44.12
AT1G02250.1	Thale cress	nucleus	41.15	43.65
AT3G04420.1	Thale cress	nucleus	38.28	42.98
AT1G02230.1	Thale cress	nucleus	39.58	42.34
Bra033305.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	30.99	42.2
Bra010895.1-P	Field mustard	nucleus	12.5	39.02
AT1G02220.1	Thale cress	nucleus	39.84	38.83
Bra033306.1-P	Field mustard	nucleus	31.25	31.25
Bra027596.1-P	Field mustard	nucleus	19.53	30.99
Bra036328.1-P	Field mustard	nucleus	17.97	23.96
Bra036326.1-P	Field mustard	nucleus	21.88	22.7
Bra036327.1-P	Field mustard	cytosol	24.48	22.12
Bra008553.1-P	Field mustard	cytosol, nucleus, plasma membrane	24.74	21.44
KRH06324	Soybean	cytosol	14.84	21.35
Bra033297.1-P	Field mustard	nucleus	11.72	20.0
Bra033296.1-P	Field mustard	nucleus	23.7	19.16
KRH47750	Soybean	cytosol	14.84	18.51
KRH47748	Soybean	cytosol	19.27	18.27
KRH06326	Soybean	nucleus	19.79	17.63
Os06t0101800-01	Rice	nucleus	16.41	17.55
KRH06327	Soybean	cytosol	17.71	17.0
TraesCS7A01G000300.1	Wheat	nucleus	18.75	13.64
KRH47747	Soybean	nucleus	16.67	12.88
HORVU7Hr1G000910.1	Barley	nucleus	17.71	12.83
TraesCS4A01G499900.1	Wheat	plastid	18.75	12.5
TraesCS7D01G000200.1	Wheat	plastid	17.19	11.76
EER87676	Sorghum	plastid	19.01	11.32
Zm00001d045617_P001	Maize	nucleus, plasma membrane, vacuole	17.45	10.97

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra033303	EnsemblPlants:Bra033303.1	EnsemblPlants:Bra033303.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4EWW8	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF58	SUPFAM:SSF101941
UniParc:UPI0002544F72	SEG:seg	:	:	:	:

Description

AT1G02230 (E=2e-071) ANAC004 | ANAC004 (Arabidopsis NAC domain containing protein 4); transcription factor

Coordinates

chrA10:+:4378698..4380330

Molecular Weight (calculated)

43568.1 Da

IEP (calculated)

4.808

GRAVY (calculated)

-0.613

Length

384 amino acids

Sequence
(BLAST)

001: MGDPVGYRFH PTDEEIVGDY VRPKNIESNT SHVDEVMNTV DIYEFDPWEL LCKSRINSTD EVWYFFGCKK DQQNRGERQS RRTKSGFWKK TGVTMDIMRK
101: RGNREKIGEK RVFVFQYSKI LGGPSKPKSD WVMHEYVATF LSPNFPNQTM TYTVCKVMFK GDERVLSSSS SAVAGEIEHD LSLIPLVDTY SAGLSIETEV
201: DPRQFTGFLH LEEETQFEDE MFRVFNNLPT DDWNSLFNND EEQGNTMFMQ EDRNDYRPKK SLTGVFVSDD DSDSDSITTT CSLKSSSTCV TFGSSNPPIY
301: LPDSPCSTIE SVSLTQEVSK ALGANSAISE KKMSPCDDDA QVSEVGGDQM GQEMVVKNKR AGFIYRMVQK FAKKIKLCSC VSRT

Best Arabidopsis Sequence Match ( AT1G02250.1 )
(BLAST)

001: MANPVGFRFR PTDGEIVDIY LRPKNLESNT SHVDEVISTV DICSFDPWDL PSHSRMKTRD QVWYFFGRKE NKYGKGDRQI RKTKSGFWKK TGVTMDIMRK
101: TGDREKIGEK RVLVFKNHGG SKSDWAMHEY HATFSSPNQI MTYTLCKVKF KGERREFSVA TGSGIKHTHS LIPPTNNSGV LSVETEGSLF HSQESQNPSQ
201: FSGFLDVDAL DRDFCNILSD DFKGFFNDDD EQSKIVSMQD DRNNHTPQKP LTGVFSDHST DGSDSDPISA TTISIQTLST CPSFGSSNPL YQITDLQESP
301: NSIKLVSLAQ EVSKTPGTGI DNDAQGTEIG EHKLGQETIK NKRAGFFHRM IQKFVKKIHL RT

Arabidopsis Description

NAC005NAC domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:O81914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.