Factsheet for Bra033300.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89993	Canola	nucleus	81.05	79.66
Bra033303.1-P	Field mustard	nucleus	54.9	65.62
CDY15221	Canola	cytosol, nucleus, peroxisome	59.48	64.24
Bra033308.1-P	Field mustard	nucleus	47.06	54.55
Bra033298.1-P	Field mustard	nucleus	35.08	43.05
Bra032615.1-P	Field mustard	nucleus	20.7	42.41
AT3G04420.1	Thale cress	nucleus	31.59	42.4
AT1G02230.1	Thale cress	nucleus	32.9	42.06
Bra033302.1-P	Field mustard	nucleus	23.75	41.92
AT1G02250.1	Thale cress	nucleus	32.46	41.16
Bra033299.1-P	Field mustard	nucleus	21.35	39.04
Bra033305.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	23.97	39.01
AT1G02220.1	Thale cress	nucleus	33.33	38.83
Bra010895.1-P	Field mustard	nucleus	9.59	35.77
Bra033306.1-P	Field mustard	nucleus	27.02	32.29
Bra027596.1-P	Field mustard	nucleus	16.56	31.41
Bra036326.1-P	Field mustard	nucleus	19.39	24.05
Bra036328.1-P	Field mustard	nucleus	14.81	23.61
Bra008553.1-P	Field mustard	cytosol, nucleus, plasma membrane	22.0	22.8
KRH06324	Soybean	cytosol	13.07	22.47
Bra036327.1-P	Field mustard	cytosol	20.48	22.12
Bra033297.1-P	Field mustard	nucleus	9.8	20.0
Bra033296.1-P	Field mustard	nucleus	19.61	18.95
KRH06327	Soybean	cytosol	16.12	18.5
Os06t0101800-01	Rice	nucleus	14.16	18.11
KRH47750	Soybean	cytosol	11.76	17.53
KRH06326	Soybean	nucleus	16.34	17.4
KRH47748	Soybean	cytosol	14.6	16.54
TraesCS7A01G000300.1	Wheat	nucleus	16.99	14.77
TraesCS4A01G499900.1	Wheat	plastid	17.65	14.06
HORVU7Hr1G000910.1	Barley	nucleus	16.12	13.96
KRH47747	Soybean	nucleus	14.38	13.28
Zm00001d045617_P001	Maize	nucleus, plasma membrane, vacuole	17.43	13.09
TraesCS7D01G000200.1	Wheat	plastid	15.9	13.01
EER87676	Sorghum	plastid	17.86	12.71

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra033300	EnsemblPlants:Bra033300.1	EnsemblPlants:Bra033300.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4EWW5	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF58	SUPFAM:SSF101941
UniParc:UPI0002544F75	SEG:seg	:	:	:	:

Description

AT1G02230 (E=9e-040) ANAC004 | ANAC004 (Arabidopsis NAC domain containing protein 4); transcription factor

Coordinates

chrA10:+:4393105..4395224

Molecular Weight (calculated)

51094.6 Da

IEP (calculated)

5.375

GRAVY (calculated)

-0.651

Length

459 amino acids

Sequence
(BLAST)

001: MVDPVGYRFR PTDEEIVGHY VRPKNLESNT SHVDEVMNTV DIYSFDPWEL PCKSRIKSRD EVVWYFFGCK KQMHNNKQRR STASGFWSKT GDTTPIIRKK
101: GDHEKIGEKR VFVFKYSSKI PGGSKSKSKS KSKSDWVMHE YVATFSSPDS QTMMMTYTVC KVMFKGDPTD LPSSSAAASV GSGEIEQNHS PITHMNSNSS
201: GGLSTETEVQ NPNQTTTVSL IPVNNSSEGL STEAEVEYRD RGGRSHQITS SISLVPHVNN NNSGGLSTET EVDPRLFSGF LYLEEDARIE DATLRAFNSL
301: PNNDDAEEQE ELVNLWSMQE DRNDHRPKMP LTGFISDDDD SDSESLYATT TCSIKSSTTC VSFASSNPPI DQIIYLPESP RSTIESVSLT QEVSKALGAN
401: SAISEKKMSP CDDDAQVSEI GGDQMGQEMV IKNKRAGFIY RMIQKFAKKI KLCSCVSRI

Best Arabidopsis Sequence Match ( AT1G02220.1 )
(BLAST)

001: METPVGLRFC PTDEEIVVDY LWPKNSDRDT SHVDRFINTV PVCRLDPWEL PCQSRIKLKD VAWCFFRPKE NKYGRGDQQM RKTKSGFWKS TGRPKPIMRN
101: RQQIGEKKIL MFYTSKESKS DWVIHEYHGF SHNQMMMTYT LCKVMFNGGM REKSSSSPSS SGVSGIEQSR RDSLIPQLVN NSEGSSLHRE DPSQFGDVLQ
201: EAPIEDAKLT EELVKWLMND EDDAQIEDAI PIEEWETWLN DIDDAKEKSI MFMHDNRSDY RPPNSLTGVF SDDVSSDDND SDLLTPKTNS IQTSSTCDSF
301: GSSNHRIDQI KDLQESPTST INLVSLTQEV SQALITSIDT AEKKKNPYDD AQGTEIGEHK LGQETIKKKR AGFFHRMIQK FVKKIHLCSS ISRT

Arabidopsis Description

NAC003NAC domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5PP28]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.