Factsheet for Bra004768.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002403.1-P
Bra003423.1-P
Bra006619.1-P
Bra007547.1-P
Bra014481.1-P
Bra020182.1-P
Bra027174.1-P
Bra030034.1-P
Bra032817.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G43510.1	Bra030034.1-P	AT1G27300.1	21798944
AT2G43510.1	Bra032817.1-P	AT1G27300.1	21798944
AT2G43510.1	Bra027174.1-P	AT3G16310.1	21798944
AT2G43510.1	Bra003423.1-P	AT3G60600.1	21798944
AT2G43510.1	Bra007547.1-P	AT3G60600.1	21798944
AT2G43510.1	Bra014481.1-P	AT3G60600.1	21798944
AT2G43510.1	Bra002403.1-P	AT5G22290.1	21798944
AT2G43510.1	Bra006619.1-P	AT5G22290.1	21798944
AT2G43510.1	Bra020182.1-P	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79817	Canola	extracellular	100.0	100.0
CDY17920	Canola	extracellular	98.86	98.86
AT2G43510.1	Thale cress	extracellular	82.95	82.02
Bra000309.1-P	Field mustard	extracellular	64.77	61.96
Bra037706.1-P	Field mustard	extracellular	68.18	61.86
Bra037705.1-P	Field mustard	extracellular	67.05	60.2
Bra004770.1-P	Field mustard	extracellular	65.91	57.43
Bra004769.1-P	Field mustard	extracellular	62.5	56.12
Bra037707.1-P	Field mustard	extracellular	60.23	55.79
Bra037702.1-P	Field mustard	extracellular	50.0	49.44
Bra037703.1-P	Field mustard	extracellular	45.45	47.62
Bra037710.1-P	Field mustard	extracellular	47.73	44.21
Bra037709.1-P	Field mustard	extracellular	45.45	41.67

Protein Annotations

Gene3D:3.30.30.10	MapMan:35.1	EnsemblPlantsGene:Bra004768	EnsemblPlants:Bra004768.1	EnsemblPlants:Bra004768.1-P	GO:GO:0003674
GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0008200
GO:GO:0009605	GO:GO:0009607	GO:GO:0050832	GO:GO:0065009	InterPro:IPR036574	UniProt:M4CKN3
PFAM:PF00537	SMART:SM00505	SUPFAM:SSF57095	InterPro:Scorpion_toxin-like	InterPro:Scorpion_toxin-like_sf	InterPro:Scorpion_toxinL/defensin
SignalP:SignalP-noTM	UniParc:UPI00006839BB	SEG:seg	:	:	:

Description

AT2G43510 (E=2e-034) ATTI1 | ATTI1; serine-type endopeptidase inhibitor

Coordinates

chrA05:+:1740242..1740588

Molecular Weight (calculated)

9951.1 Da

IEP (calculated)

7.602

GRAVY (calculated)

0.031

Length

88 amino acids

Sequence
(BLAST)

1: MAIKPLSIFV VFFIFFLVIS DMPEIEAQDS KCLREYGGDV GFGFCAPRIF PTFCYTRCRE NKGAKGGRCR WGQGTNVTCL CDYCNDQP

Best Arabidopsis Sequence Match ( AT2G43510.1 )
(BLAST)

1: MAKAIVSIFV VFFIFFLVIS DVPEIEAQGN ECLKEYGGDV GFGFCAPRIF PTICYTRCRE NKGAKGGRCR WGQGSNVKCL CDFCDDTPQ

Arabidopsis Description

ATTI1TI1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRC4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.