Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79816 | Canola | extracellular | 98.98 | 97.98 |
| Bra004770.1-P | Field mustard | extracellular | 73.47 | 71.29 |
| Bra000309.1-P | Field mustard | extracellular | 62.24 | 66.3 |
| Bra037707.1-P | Field mustard | extracellular | 62.24 | 64.21 |
| Bra037706.1-P | Field mustard | extracellular | 63.27 | 63.92 |
| AT1G47540.2 | Thale cress | extracellular | 63.27 | 62.63 |
| Bra004768.1-P | Field mustard | extracellular | 56.12 | 62.5 |
| Bra037705.1-P | Field mustard | extracellular | 62.24 | 62.24 |
| AT2G43535.1 | Thale cress | extracellular | 59.18 | 59.79 |
| Bra037702.1-P | Field mustard | extracellular | 42.86 | 47.19 |
| Bra037709.1-P | Field mustard | extracellular | 43.88 | 44.79 |
| Bra037710.1-P | Field mustard | extracellular | 41.84 | 43.16 |
| Bra037703.1-P | Field mustard | extracellular | 36.73 | 42.86 |
Protein Annotations
| Gene3D:3.30.30.10 | MapMan:35.1 | EnsemblPlantsGene:Bra004769 | EnsemblPlants:Bra004769.1 | EnsemblPlants:Bra004769.1-P | GO:GO:0003674 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008200 |
| GO:GO:0065009 | InterPro:IPR036574 | UniProt:M4CKN4 | PFAM:PF00537 | SMART:SM00505 | SUPFAM:SSF57095 |
| InterPro:Scorpion_toxin-like | InterPro:Scorpion_toxin-like_sf | InterPro:Scorpion_toxinL/defensin | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0002547B6A |
| SEG:seg | : | : | : | : | : |
Description
AT1G47540 (E=1e-026) | trypsin inhibitor, putative
Coordinates
chrA05:+:1742714..1743179
Molecular Weight (calculated)
10708.9 Da
IEP (calculated)
4.141
GRAVY (calculated)
0.343
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MAFATKSVSS FAIIFILVLV IFEVPEIEAQ DDECLKEYGG DVGFSFCAPE IFPSFFYTNC RKDKGALGGT CIWGDSDVKC LCDYCSDIPN GKILRGGI
1: MATKSVSTFA IFFILVLAIF ETPEIEAYDR KCLKEYGGDV GFSYCAPRIF PTFCDQNCRK NKGAKGGVCR WEENNAIGVK CLCNFCSEEP SDQTLSRI
Arabidopsis Description
Scorpion toxin-like knottin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HTA0]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.