Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G43520.1 | Thale cress | extracellular | 60.61 | 66.67 |
| CDX79816 | Canola | extracellular | 64.65 | 64.65 |
| Bra004769.1-P | Field mustard | extracellular | 62.63 | 63.27 |
| CDY58533 | Canola | extracellular | 54.55 | 62.79 |
| AT2G43510.1 | Thale cress | extracellular | 55.56 | 61.8 |
| AT2G43535.1 | Thale cress | extracellular | 59.6 | 60.82 |
| CDX79815 | Canola | extracellular | 61.62 | 59.8 |
| CDY58530 | Canola | extracellular | 61.62 | 59.8 |
| AT2G43530.1 | Thale cress | extracellular | 49.49 | 59.04 |
| Bra004770.1-P | Field mustard | extracellular | 59.6 | 58.42 |
| AT2G43550.1 | Thale cress | extracellular | 44.44 | 49.44 |
Protein Annotations
| Gene3D:3.30.30.10 | MapMan:35.1 | EntrezGene:841163 | ProteinID:AEE32183.1 | ArrayExpress:AT1G47540 | EnsemblPlantsGene:AT1G47540 |
| RefSeq:AT1G47540 | TAIR:AT1G47540 | RefSeq:AT1G47540-TAIR-G | EnsemblPlants:AT1G47540.2 | TAIR:AT1G47540.2 | Unigene:At.27098 |
| UniProt:F4HTA0 | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0008200 | GO:GO:0065009 | InterPro:IPR036574 | RefSeq:NP_973985.1 | PFAM:PF00537 |
| SMART:SM00505 | SUPFAM:SSF57095 | InterPro:Scorpion_toxin-like | InterPro:Scorpion_toxin-like_sf | InterPro:Scorpion_toxinL/defensin | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI000034F464 | SEG:seg | : | : | : |
Description
Scorpion toxin-like knottin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HTA0]
Coordinates
chr1:-:17455533..17456156
Molecular Weight (calculated)
11064.3 Da
IEP (calculated)
6.343
GRAVY (calculated)
-0.085
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MATKSVSTFA IFFILVLAIF AETPEIEAYD RKCLKEYGGD VGFSYCAPRI FPTFCDQNCR KNKGAKGGVC RWEENNAIGV KCLCNFCSEE PSDQTLSRI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.