Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G43510.1 | Thale cress | extracellular | 56.7 | 61.8 |
| AT1G47540.2 | Thale cress | extracellular | 60.82 | 59.6 |
| CDX79816 | Canola | extracellular | 60.82 | 59.6 |
| Bra004769.1-P | Field mustard | extracellular | 59.79 | 59.18 |
| AT2G43520.1 | Thale cress | extracellular | 52.58 | 56.67 |
| CDX79815 | Canola | extracellular | 58.76 | 55.88 |
| CDY58530 | Canola | extracellular | 58.76 | 55.88 |
| Bra004770.1-P | Field mustard | extracellular | 57.73 | 55.45 |
| AT2G43530.1 | Thale cress | extracellular | 47.42 | 55.42 |
| CDY58533 | Canola | extracellular | 48.45 | 54.65 |
| AT2G43550.1 | Thale cress | extracellular | 44.33 | 48.31 |
Protein Annotations
| Gene3D:3.30.30.10 | MapMan:35.1 | EntrezGene:818955 | UniProt:A0A178VV23 | ProteinID:AAM14812.1 | ProteinID:AEC10287.1 |
| EMBL:AK228120 | ArrayExpress:AT2G43535 | EnsemblPlantsGene:AT2G43535 | RefSeq:AT2G43535 | TAIR:AT2G43535 | RefSeq:AT2G43535-TAIR-G |
| EnsemblPlants:AT2G43535.1 | TAIR:AT2G43535.1 | EMBL:AY088677 | EMBL:BT009648 | ProteinID:CAG15158.1 | ProteinID:CAG15168.1 |
| ProteinID:CAG15173.1 | ProteinID:CAG15178.1 | ProteinID:CAG15184.1 | ProteinID:CAG15190.1 | ProteinID:CAG15196.1 | ProteinID:CAG15201.1 |
| ProteinID:CAG15206.1 | ProteinID:CAG15211.1 | ProteinID:CAG15216.1 | ProteinID:CAG15221.1 | ProteinID:CAG15226.1 | ProteinID:CAG15231.1 |
| ProteinID:CAG15236.1 | ProteinID:CAG15241.1 | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006950 |
| GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008200 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0031640 |
| GO:GO:0050832 | GO:GO:0065009 | MEROPS:I18.002 | InterPro:IPR036574 | RefSeq:NP_566000.1 | ProteinID:OAP09666.1 |
| PFAM:PF00537 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | UniProt:Q8RYE7 |
| SMART:SM00505 | SUPFAM:SSF57095 | InterPro:Scorpion_toxin-like | InterPro:Scorpion_toxin-like_sf | InterPro:Scorpion_toxinL/defensin | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI00000A0B28 | SEG:seg | : | : | : |
Description
ATTI4Defensin-like protein 196 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYE7]
Coordinates
chr2:+:18070960..18071826
Molecular Weight (calculated)
10672.0 Da
IEP (calculated)
5.035
GRAVY (calculated)
0.323
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKMSALSIF AIFIILVLVI FEIPEIEAHD SECLKEYGGD VGFGFCAPKI FPTICYRNCQ KDKGANGGKC LWGEGGKVKC LCDFCSNESF NQFISLT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.