Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79816 | Canola | extracellular | 75.58 | 65.66 |
| CDX79815 | Canola | extracellular | 73.26 | 61.76 |
| CDY58530 | Canola | extracellular | 73.26 | 61.76 |
| CDY23374 | Canola | extracellular | 69.77 | 61.22 |
| CDX83478 | Canola | extracellular | 59.3 | 57.3 |
| CDY30415 | Canola | extracellular | 65.12 | 56.0 |
| CDX83479 | Canola | extracellular | 60.47 | 55.91 |
| CDY30416 | Canola | extracellular | 65.12 | 55.45 |
| CDY30414 | Canola | extracellular | 61.63 | 55.21 |
| AT1G47540.2 | Thale cress | extracellular | 62.79 | 54.55 |
| CDX79817 | Canola | extracellular | 55.81 | 54.55 |
| CDY44232 | Canola | extracellular | 51.16 | 54.32 |
| CDY23377 | Canola | extracellular | 62.79 | 53.47 |
| CDY17920 | Canola | extracellular | 54.65 | 53.41 |
| AT2G43535.1 | Thale cress | extracellular | 54.65 | 48.45 |
| CDY30411 | Canola | extracellular | 43.02 | 38.95 |
| CDY23371 | Canola | extracellular | 43.02 | 38.95 |
| CDY58529 | Canola | extracellular, nucleus, plasma membrane | 55.81 | 38.1 |
| CDY30412 | Canola | extracellular | 41.86 | 37.11 |
| CDY30418 | Canola | extracellular | 38.37 | 37.08 |
| CDY23378 | Canola | plasma membrane | 38.37 | 37.08 |
| CDY44233 | Canola | extracellular | 11.63 | 10.75 |
Protein Annotations
| EnsemblPlants:CDY58533 | EnsemblPlantsGene:GSBRNA2T00024823001 | Gene3D:3.30.30.10 | GO:A0A078J5Z6 | InterPro:IPR036574 | InterPro:Scorpion_toxin-like_sf |
| ProteinID:CDY58533 | ProteinID:CDY58533.1 | SignalP:SignalP-noTM | SUPFAM:SSF57095 | UniParc:UPI0004EE427E | UniProt:A0A078J5Z6 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC04g53020DBnaC04g53020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5Z6]
Coordinates
chrLK033677:+:38974..39751
Molecular Weight (calculated)
9477.5 Da
IEP (calculated)
4.585
GRAVY (calculated)
0.348
Length
86 amino acids
Sequence
(BLAST)
(BLAST)
1: MATKSVSSFT LIFILVLVIF EVPEIKAQDS ECLKEYGGNV GFNFCAPRIY PSFCGICRWG DSPDSVKCLC EYCSDQISHQ ILSGGI
1: MATKSVSTFA IFFILVLAIF ETPEIEAYDR KCLKEYGGDV GFSYCAPRIF PTFCDQNCRK NKGAKGGVCR WEENNAIGVK CLCNFCSEEP SDQTLSRI
Arabidopsis Description
Scorpion toxin-like knottin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HTA0]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.