Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44232 | Canola | extracellular | 12.9 | 14.81 |
| CDX83478 | Canola | extracellular | 13.98 | 14.61 |
| CDX83479 | Canola | extracellular | 13.98 | 13.98 |
| CDY23371 | Canola | extracellular | 13.98 | 13.68 |
| CDY30411 | Canola | extracellular | 13.98 | 13.68 |
| CDX79817 | Canola | extracellular | 12.9 | 13.64 |
| CDY17920 | Canola | extracellular | 12.9 | 13.64 |
| CDY23374 | Canola | extracellular | 13.98 | 13.27 |
| CDX79816 | Canola | extracellular | 13.98 | 13.13 |
| CDY30415 | Canola | extracellular | 13.98 | 13.0 |
| CDY30416 | Canola | extracellular | 13.98 | 12.87 |
| CDY30412 | Canola | extracellular | 12.9 | 12.37 |
| CDY58533 | Canola | extracellular | 10.75 | 11.63 |
| CDY30414 | Canola | extracellular | 11.83 | 11.46 |
| AT2G43520.1 | Thale cress | extracellular | 10.75 | 11.11 |
| CDY23377 | Canola | extracellular | 11.83 | 10.89 |
| CDY58530 | Canola | extracellular | 11.83 | 10.78 |
| CDX79815 | Canola | extracellular | 11.83 | 10.78 |
| CDY30418 | Canola | extracellular | 9.68 | 10.11 |
| CDY23378 | Canola | plasma membrane | 9.68 | 10.11 |
| CDY58529 | Canola | extracellular, nucleus, plasma membrane | 12.9 | 9.52 |
Protein Annotations
| EnsemblPlants:CDY44233 | EnsemblPlantsGene:GSBRNA2T00079732001 | GO:A0A078I4Z9 | ProteinID:CDY44233 | ProteinID:CDY44233.1 | SignalP:SignalP-noTM |
| UniParc:UPI0004EE1907 | UniProt:A0A078I4Z9 | MapMan:35.2 | : | : | : |
Description
BnaC03g24250DBnaC03g24250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I4Z9]
Coordinates
chrLK032583:+:74488..75816
Molecular Weight (calculated)
9996.3 Da
IEP (calculated)
7.910
GRAVY (calculated)
0.269
Length
93 amino acids
Sequence
(BLAST)
(BLAST)
1: MGKTTKSVFI IAVLFFVISK AAAEIEVGEP GCAIDSRGDV DRLCVKQPPL CDCYCRLIKR AVGGGRCVGH ITENLGCVCY MCNTTNASDS YKL
1: MKFVSVFLVL FIFFLVVLEA PEKIEAKDDK FICVVEYGGD VGPTFCNPKF FPTLCRQNCR SFKGAKGGKC VKQPKHKHIK CFCDYCKDD
Arabidopsis Description
ATTI6Defensin-like protein 197 [Source:UniProtKB/Swiss-Prot;Acc:O22869]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.