Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037709.1-P | Field mustard | extracellular | 95.88 | 96.88 |
| CDY23371 | Canola | extracellular | 55.67 | 56.84 |
| CDY30411 | Canola | extracellular | 53.61 | 54.74 |
| CDX83478 | Canola | extracellular | 45.36 | 49.44 |
| AT2G43530.1 | Thale cress | extracellular | 42.27 | 49.4 |
| CDX83479 | Canola | extracellular | 46.39 | 48.39 |
| CDX79817 | Canola | extracellular | 42.27 | 46.59 |
| CDY17920 | Canola | extracellular | 42.27 | 46.59 |
| CDY30416 | Canola | extracellular | 47.42 | 45.54 |
| CDX79816 | Canola | extracellular | 46.39 | 45.45 |
| CDY23374 | Canola | extracellular | 44.33 | 43.88 |
| CDY30414 | Canola | extracellular | 43.3 | 43.75 |
| CDY23377 | Canola | extracellular | 45.36 | 43.56 |
| CDX79815 | Canola | extracellular | 45.36 | 43.14 |
| CDY58530 | Canola | extracellular | 45.36 | 43.14 |
| CDY30415 | Canola | extracellular | 44.33 | 43.0 |
| CDY44232 | Canola | extracellular | 35.05 | 41.98 |
| CDY58533 | Canola | extracellular | 37.11 | 41.86 |
| CDY30418 | Canola | extracellular | 32.99 | 35.96 |
| CDY23378 | Canola | plasma membrane | 32.99 | 35.96 |
| CDY58529 | Canola | extracellular, nucleus, plasma membrane | 43.3 | 33.33 |
| CDY44233 | Canola | extracellular | 12.37 | 12.9 |
Protein Annotations
| EnsemblPlants:CDY30412 | EnsemblPlantsGene:GSBRNA2T00045111001 | Gene3D:3.30.30.10 | GO:A0A078GYV6 | GO:GO:0003674 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0008150 | GO:GO:0008200 | GO:GO:0065009 | InterPro:IPR036574 | InterPro:Scorpion_toxin-like_sf |
| InterPro:Scorpion_toxinL/defensin | PFAM:PF00537 | ProteinID:CDY30412 | ProteinID:CDY30412.1 | SignalP:SignalP-noTM | SUPFAM:SSF57095 |
| TMHMM:TMhelix | UniParc:UPI0004EE4094 | UniProt:A0A078GYV6 | MapMan:35.2 | : | : |
Description
BnaA04g25130DBnaA04g25130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GYV6]
Coordinates
chrLK032253:+:200334..200997
Molecular Weight (calculated)
10712.0 Da
IEP (calculated)
4.986
GRAVY (calculated)
0.222
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MAMKSLSFFA VLIILFLVIF AEVPEIEAEP CLKQYVGGFT SDSCFGQEIQ VCYWKCRLKN KAKGGICYSG EGVNNYKCLC DFCSDNPACV GGPSHYD
1: MAMKSVSTLA VFAILFLVIV EMPEIKAQGS KCLKEYGGNV GFSYCAPRIF PSFCYRNCRK NKGAKGGRCR SGGAGAGSMI CLCDYCSDKP
Arabidopsis Description
ATTI2TI2 [Source:UniProtKB/TrEMBL;Acc:A0A178W058]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.