Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 6
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037702.1-P | Field mustard | extracellular | 100.0 | 100.0 |
| CDY23378 | Canola | plasma membrane | 97.75 | 97.75 |
| AT2G43550.1 | Thale cress | extracellular | 78.65 | 78.65 |
| CDX79817 | Canola | extracellular | 49.44 | 50.0 |
| CDY17920 | Canola | extracellular | 49.44 | 50.0 |
| CDX83479 | Canola | extracellular | 48.31 | 46.24 |
| CDX83478 | Canola | extracellular | 44.94 | 44.94 |
| CDX79816 | Canola | extracellular | 48.31 | 43.43 |
| CDY44232 | Canola | extracellular | 39.33 | 43.21 |
| CDY30414 | Canola | extracellular | 46.07 | 42.71 |
| CDX79815 | Canola | extracellular | 47.19 | 41.18 |
| CDY58530 | Canola | extracellular | 47.19 | 41.18 |
| CDY23374 | Canola | extracellular | 44.94 | 40.82 |
| CDY30416 | Canola | extracellular | 44.94 | 39.6 |
| CDY30415 | Canola | extracellular | 43.82 | 39.0 |
| CDY23377 | Canola | extracellular | 43.82 | 38.61 |
| CDY58533 | Canola | extracellular | 37.08 | 38.37 |
| CDY30412 | Canola | extracellular | 35.96 | 32.99 |
| CDY23371 | Canola | extracellular | 34.83 | 32.63 |
| CDY58529 | Canola | extracellular, nucleus, plasma membrane | 46.07 | 32.54 |
| CDY30411 | Canola | extracellular | 33.71 | 31.58 |
| CDY44233 | Canola | extracellular | 10.11 | 9.68 |
Protein Annotations
| Gene3D:3.30.30.10 | MapMan:35.1 | GO:A0A078H0R6 | UniProt:A0A078H0R6 | EnsemblPlants:CDY30418 | ProteinID:CDY30418 |
| ProteinID:CDY30418.1 | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0008200 | GO:GO:0065009 | EnsemblPlantsGene:GSBRNA2T00045117001 | InterPro:IPR036574 | PFAM:PF00537 |
| SMART:SM00505 | SUPFAM:SSF57095 | InterPro:Scorpion_toxin-like | InterPro:Scorpion_toxin-like_sf | InterPro:Scorpion_toxinL/defensin | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0002543CA8 | SEG:seg | : | : | : |
Description
BnaA04g25190DBnaA04g25190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0R6]
Coordinates
chrLK032253:+:209572..210271
Molecular Weight (calculated)
10062.4 Da
IEP (calculated)
8.759
GRAVY (calculated)
-0.187
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MKSVYIFIAL FIFFLAVLGE SPEKIGADEK FKCLEEYGGD VGPTFCNPKF FPTLCRQNCR SFKGAKGGKC VKKHKSKPIK CFCDYCKDD
1: MKFVSVFLVL FIFFLVVLEA PEKIEAKDDK FICVVEYGGD VGPTFCNPKF FPTLCRQNCR SFKGAKGGKC VKQPKHKHIK CFCDYCKDD
Arabidopsis Description
ATTI6Defensin-like protein 197 [Source:UniProtKB/Swiss-Prot;Acc:O22869]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.