Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 6
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037702.1-P | Field mustard | extracellular | 78.65 | 78.65 |
| CDY30418 | Canola | extracellular | 78.65 | 78.65 |
| CDY23378 | Canola | plasma membrane | 77.53 | 77.53 |
| Bra037703.1-P | Field mustard | extracellular | 66.29 | 70.24 |
| AT2G43510.1 | Thale cress | extracellular | 50.56 | 50.56 |
| AT2G43530.1 | Thale cress | extracellular | 46.07 | 49.4 |
| AT2G43520.1 | Thale cress | extracellular | 48.31 | 47.78 |
| AT1G47540.2 | Thale cress | extracellular | 49.44 | 44.44 |
| AT2G43535.1 | Thale cress | extracellular | 48.31 | 44.33 |
Protein Annotations
| Gene3D:3.30.30.10 | MapMan:35.1 | EntrezGene:818957 | ProteinID:AAB64322.2 | ProteinID:AEC10289.2 | EMBL:AK118750 |
| ArrayExpress:AT2G43550 | EnsemblPlantsGene:AT2G43550 | RefSeq:AT2G43550 | TAIR:AT2G43550 | RefSeq:AT2G43550-TAIR-G | EnsemblPlants:AT2G43550.1 |
| TAIR:AT2G43550.1 | ProteinID:CAG15159.1 | ProteinID:CAG15164.1 | ProteinID:CAG15169.1 | ProteinID:CAG15180.1 | ProteinID:CAG15186.1 |
| ProteinID:CAG15192.1 | ProteinID:CAG15197.1 | ProteinID:CAG15202.1 | ProteinID:CAG15207.1 | ProteinID:CAG15212.1 | ProteinID:CAG15217.1 |
| ProteinID:CAG15222.1 | ProteinID:CAG15227.1 | ProteinID:CAG15232.1 | ProteinID:CAG15237.1 | ProteinID:CAG15242.1 | ProteinID:CAG26677.1 |
| GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 |
| GO:GO:0008200 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0031640 | GO:GO:0050832 | GO:GO:0065009 |
| InterPro:IPR036574 | RefSeq:NP_566002.2 | UniProt:O22869 | PFAM:PF00537 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | SMART:SM00505 | SUPFAM:SSF57095 |
| InterPro:Scorpion_toxin-like | InterPro:Scorpion_toxin-like_sf | InterPro:Scorpion_toxinL/defensin | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000012DA3D |
| SEG:seg | : | : | : | : | : |
Description
ATTI6Defensin-like protein 197 [Source:UniProtKB/Swiss-Prot;Acc:O22869]
Coordinates
chr2:+:18073305..18073651
Molecular Weight (calculated)
10192.6 Da
IEP (calculated)
8.584
GRAVY (calculated)
0.020
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MKFVSVFLVL FIFFLVVLEA PEKIEAKDDK FICVVEYGGD VGPTFCNPKF FPTLCRQNCR SFKGAKGGKC VKQPKHKHIK CFCDYCKDD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.