Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000309.1-P | Field mustard | extracellular | 98.92 | 100.0 |
| CDX83478 | Canola | extracellular | 75.27 | 78.65 |
| AT2G43520.1 | Thale cress | extracellular | 72.04 | 74.44 |
| CDY44232 | Canola | extracellular | 63.44 | 72.84 |
| CDX79817 | Canola | extracellular | 61.29 | 64.77 |
| CDY30415 | Canola | extracellular | 68.82 | 64.0 |
| CDX79815 | Canola | extracellular | 69.89 | 63.73 |
| CDY58530 | Canola | extracellular | 69.89 | 63.73 |
| CDX79816 | Canola | extracellular | 67.74 | 63.64 |
| CDY17920 | Canola | extracellular | 60.22 | 63.64 |
| CDY30416 | Canola | extracellular | 67.74 | 62.38 |
| CDY23374 | Canola | extracellular | 65.59 | 62.24 |
| CDY58533 | Canola | extracellular | 55.91 | 60.47 |
| CDY23377 | Canola | extracellular | 65.59 | 60.4 |
| CDY30414 | Canola | extracellular | 60.22 | 58.33 |
| CDY30418 | Canola | extracellular | 46.24 | 48.31 |
| CDY23378 | Canola | plasma membrane | 46.24 | 48.31 |
| CDY23371 | Canola | extracellular | 48.39 | 47.37 |
| CDY30412 | Canola | extracellular | 48.39 | 46.39 |
| CDY30411 | Canola | extracellular | 47.31 | 46.32 |
| CDY58529 | Canola | extracellular, nucleus, plasma membrane | 61.29 | 45.24 |
| CDY44233 | Canola | extracellular | 13.98 | 13.98 |
Protein Annotations
| Gene3D:3.30.30.10 | MapMan:35.1 | GO:A0A078D575 | EnsemblPlants:CDX83479 | ProteinID:CDX83479 | ProteinID:CDX83479.1 |
| GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 |
| GO:GO:0008200 | EnsemblPlantsGene:GSBRNA2T00139061001 | InterPro:IPR036574 | PFAM:PF00537 | SMART:SM00505 | SUPFAM:SSF57095 |
| InterPro:Scorpion_toxin-like | InterPro:Scorpion_toxin-like_sf | InterPro:Scorpion_toxinL/defensin | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EE00A6 |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g20270D
Coordinates
chrLK031832:-:1725434..1726190
Molecular Weight (calculated)
10146.5 Da
IEP (calculated)
8.583
GRAVY (calculated)
0.084
Length
93 amino acids
Sequence
(BLAST)
(BLAST)
1: MAMATKSVSS FAILFILFLV IIAELPETKA QDRKCLQEYG GDVGFRFCAP LIYPSFCYRR CRENKGAKGG RCQSGAAGAG SMKCLCDFCS DKP
1: MAMKSVSTLA VFAILFLVIV EMPEIKAQGS KCLKEYGGNV GFSYCAPRIF PSFCYRNCRK NKGAKGGRCR SGGAGAGSMI CLCDYCSDKP
Arabidopsis Description
ATTI2TI2 [Source:UniProtKB/TrEMBL;Acc:A0A178W058]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.