Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037707.1-P | Field mustard | extracellular | 98.96 | 100.0 |
| CDY23374 | Canola | extracellular | 83.33 | 81.63 |
| CDX83478 | Canola | extracellular | 65.62 | 70.79 |
| CDY44232 | Canola | extracellular | 57.29 | 67.9 |
| CDY30415 | Canola | extracellular | 69.79 | 67.0 |
| CDX79816 | Canola | extracellular | 65.62 | 63.64 |
| CDY30416 | Canola | extracellular | 66.67 | 63.37 |
| CDY58533 | Canola | extracellular | 55.21 | 61.63 |
| CDY23377 | Canola | extracellular | 64.58 | 61.39 |
| CDX79817 | Canola | extracellular | 55.21 | 60.23 |
| CDY17920 | Canola | extracellular | 55.21 | 60.23 |
| CDX83479 | Canola | extracellular | 58.33 | 60.22 |
| CDX79815 | Canola | extracellular | 61.46 | 57.84 |
| CDY58530 | Canola | extracellular | 61.46 | 57.84 |
| CDY30418 | Canola | extracellular | 42.71 | 46.07 |
| CDY23378 | Canola | plasma membrane | 42.71 | 46.07 |
| CDY23371 | Canola | extracellular | 43.75 | 44.21 |
| CDY30412 | Canola | extracellular | 43.75 | 43.3 |
| CDY30411 | Canola | extracellular | 42.71 | 43.16 |
| CDY58529 | Canola | extracellular, nucleus, plasma membrane | 55.21 | 42.06 |
| CDY44233 | Canola | extracellular | 11.46 | 11.83 |
Protein Annotations
| Gene3D:3.30.30.10 | MapMan:35.1 | GO:A0A078GZ46 | UniProt:A0A078GZ46 | EnsemblPlants:CDY30414 | ProteinID:CDY30414 |
| ProteinID:CDY30414.1 | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0008200 | GO:GO:0065009 | EnsemblPlantsGene:GSBRNA2T00045113001 | InterPro:IPR036574 | PFAM:PF00537 |
| SMART:SM00505 | SUPFAM:SSF57095 | InterPro:Scorpion_toxin-like | InterPro:Scorpion_toxin-like_sf | InterPro:Scorpion_toxinL/defensin | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0004EF1ACC | SEG:seg | : | : | : |
Description
BnaA04g25150DBnaA04g25150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZ46]
Coordinates
chrLK032253:+:203171..203861
Molecular Weight (calculated)
10581.8 Da
IEP (calculated)
7.146
GRAVY (calculated)
0.104
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MATKSISSLA AFFFLFLVIF AEMPETEAQD SECLKEYGGD VGFSFCAPKI YPTRCVRKCR ADKGALGGKC TWEHGINVKC LCDFCRHESG QILSGI
1: MAKMSALSIF AIFIILVLVI FEIPEIEAHD SECLKEYGGD VGFGFCAPKI FPTICYRNCQ KDKGANGGKC LWGEGGKVKC LCDFCSNESF NQFISLT
Arabidopsis Description
ATTI4Defensin-like protein 196 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYE7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.