Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15220 | Canola | nucleus | 50.83 | 60.89 |
| CDY32449 | Canola | nucleus | 55.79 | 60.27 |
| CDY55325 | Canola | nucleus | 61.16 | 58.27 |
| CDY32450 | Canola | nucleus | 53.31 | 57.59 |
| CDX89994 | Canola | nucleus | 57.02 | 54.98 |
| CDY15223 | Canola | nucleus | 41.74 | 47.64 |
| CDY11741 | Canola | nucleus | 23.97 | 41.73 |
| CDX89991 | Canola | nucleus | 44.63 | 40.15 |
| CDX90132 | Canola | nucleus | 19.83 | 39.02 |
| AT1G02250.1 | Thale cress | nucleus | 51.65 | 34.53 |
| AT3G04420.1 | Thale cress | nucleus | 45.87 | 32.46 |
| CDX89995 | Canola | nucleus | 47.52 | 32.39 |
| AT1G02230.1 | Thale cress | nucleus | 47.11 | 31.75 |
| CDY59815 | Canola | cytosol | 33.06 | 29.96 |
| CDY15210 | Canola | cytosol, nucleus, plastid | 31.41 | 29.34 |
| CDX89990 | Canola | nucleus | 47.11 | 28.79 |
| CDY15214 | Canola | nucleus | 33.47 | 27.36 |
| CDY15218 | Canola | nucleus | 40.91 | 27.12 |
| CDY07138 | Canola | nucleus | 31.41 | 26.39 |
| CDY15224 | Canola | cytosol | 39.67 | 25.67 |
| CDY15225 | Canola | nucleus | 40.91 | 24.81 |
| KRH06324 | Soybean | cytosol | 27.27 | 24.72 |
| CDY15221 | Canola | cytosol, nucleus, peroxisome | 42.15 | 24.0 |
| AT1G02220.1 | Thale cress | nucleus | 37.6 | 23.1 |
| CDX89996 | Canola | nucleus | 23.14 | 21.71 |
| KRH47750 | Soybean | cytosol | 27.27 | 21.43 |
| CDX89993 | Canola | nucleus | 39.26 | 20.34 |
| CDY07135 | Canola | nucleus | 29.75 | 19.41 |
| CDX97252 | Canola | cytosol | 33.06 | 18.74 |
| CDY15215 | Canola | nucleus | 32.64 | 18.59 |
| Os06t0101800-01 | Rice | nucleus | 26.03 | 17.55 |
| CDY07136 | Canola | cytosol | 30.17 | 17.14 |
| KRH47748 | Soybean | cytosol | 28.51 | 17.04 |
| CDY59814 | Canola | cytosol | 29.34 | 16.71 |
| CDY01928 | Canola | cytosol, nucleus, vacuole | 33.47 | 16.67 |
| CDY15217 | Canola | nucleus | 23.55 | 16.33 |
| CDY15212 | Canola | nucleus | 28.51 | 16.24 |
| CDX89999 | Canola | nucleus | 31.82 | 16.21 |
| CDY59812 | Canola | cytosol | 28.93 | 15.52 |
| KRH06326 | Soybean | nucleus | 27.27 | 15.31 |
| KRH06327 | Soybean | cytosol | 25.21 | 15.25 |
| KRH47747 | Soybean | nucleus | 26.86 | 13.08 |
| TraesCS7A01G000300.1 | Wheat | nucleus | 25.62 | 11.74 |
| HORVU7Hr1G000910.1 | Barley | nucleus | 24.38 | 11.13 |
| TraesCS7D01G000200.1 | Wheat | plastid | 25.62 | 11.05 |
| TraesCS4A01G499900.1 | Wheat | plastid | 26.03 | 10.94 |
| Zm00001d045617_P001 | Maize | nucleus, plasma membrane, vacuole | 26.45 | 10.47 |
| EER87676 | Sorghum | plastid | 27.69 | 10.39 |
| CDY07137 | Canola | extracellular, plasma membrane | 9.5 | 7.32 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078J0S1 | UniProt:A0A078J0S1 | EnsemblPlants:CDY55326 | ProteinID:CDY55326 |
| ProteinID:CDY55326.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00016677001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF57 | SUPFAM:SSF101941 | UniParc:UPI0004EE825F | SEG:seg | : | : |
Description
BnaC08g49770DBnaC08g49770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0S1]
Coordinates
chrLK033393:+:46624..47644
Molecular Weight (calculated)
27509.1 Da
IEP (calculated)
6.514
GRAVY (calculated)
-0.775
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MENLVGLRFI PTDEEIVDHY LRLKNIGGSN TSHVDEVIST VNICNFDPWD LPPQSRIASS DQVWHFFGRK ESKYNKGERQ KRKTKSGFWK KTGNTLPIKR
101: KRGNRQKIGE KQVLVFYKNG SKSNWVMHEY HASCLSPPQS GAYTICKVQF KGEASEISSS SGVDNVEHSP TPMTNPGGSE SPSQFSGFRD HQQEMQFESE
201: TQTDFEELLS YDLNSLLDYD GDEQIEIASM QKSMTSIFIG HI
101: KRGNRQKIGE KQVLVFYKNG SKSNWVMHEY HASCLSPPQS GAYTICKVQF KGEASEISSS SGVDNVEHSP TPMTNPGGSE SPSQFSGFRD HQQEMQFESE
201: TQTDFEELLS YDLNSLLDYD GDEQIEIASM QKSMTSIFIG HI
001: MMNPVGFRFR PNDEEIVDHY LRPKNLDSDT SHVDEVISTV DICSFEPWDL PSKSMIKSRD GVWYFFSVKE MKYNRGDQQR RRTNSGFWKK TGKTMTVMRK
101: RGNREKIGEK RVLVFKNRDG SKTDWVMHEY HATSLFPNQM MTYTVCKVEF KGEETEISSS STGSEIEQIH SLIPLVNSSG GSEGSSFHSQ ELQNSSQSGV
201: FANVQGESQI DDATTPIEEE WKTWLNNDGD EQRNIMFMQD HRSDYTPLKS LTGVFSDDSS DDNDSDLISP KTNSIGTSST CASFASSNHQ IDQTQHSPDS
301: TVQLVSLTQE VSQGPGQVTV IREHKLGEES VKKKRASFVY RMIHRLVKKI HQCYSISRT
101: RGNREKIGEK RVLVFKNRDG SKTDWVMHEY HATSLFPNQM MTYTVCKVEF KGEETEISSS STGSEIEQIH SLIPLVNSSG GSEGSSFHSQ ELQNSSQSGV
201: FANVQGESQI DDATTPIEEE WKTWLNNDGD EQRNIMFMQD HRSDYTPLKS LTGVFSDDSS DDNDSDLISP KTNSIGTSST CASFASSNHQ IDQTQHSPDS
301: TVQLVSLTQE VSQGPGQVTV IREHKLGEES VKKKRASFVY RMIHRLVKKI HQCYSISRT
Arabidopsis Description
NAC004NAC domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81913]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.