Factsheet for HORVU0Hr1G015930.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G076010.1
HORVU2Hr1G081800.3
HORVU3Hr1G026980.2
HORVU3Hr1G071060.1
HORVU5Hr1G071910.1
HORVU7Hr1G048940.3
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10030.1	HORVU1Hr1G076010.1	AT3G16310.1	21798944
AT1G10030.1	HORVU3Hr1G026980.2	AT3G16310.1	21798944
AT1G10030.1	HORVU3Hr1G071060.1	AT3G16310.1	21798944
AT1G10030.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944
AT1G10030.1	HORVU2Hr1G081800.3	AT4G26455.1	21798944
AT1G10030.1	HORVU5Hr1G071910.1	AT4G26455.1	21798944
AT1G10030.1	HORVU7Hr1G048940.3	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G215700.1	Wheat	extracellular, golgi, plasma membrane	94.29	94.29
TraesCS6D01G198000.1	Wheat	plasma membrane	92.86	94.2
TraesCS6B01G245300.1	Wheat	extracellular, golgi, plasma membrane	85.71	85.71
GSMUA_Achr7P08060_001	Banana	extracellular, golgi, plasma membrane	52.86	56.92
AT1G10030.1	Thale cress	extracellular, golgi	52.14	56.59
GSMUA_Achr6P30120_001	Banana	extracellular	52.14	56.15
Bra018466.1-P	Field mustard	extracellular	50.71	55.04
KRH62124	Soybean	extracellular, golgi	50.71	55.04
CDY63742	Canola	extracellular, golgi	50.0	54.26
KRH52827	Soybean	extracellular	50.0	54.26
CDY57928	Canola	extracellular, golgi, vacuole	50.0	54.26
CDY31053	Canola	extracellular	50.0	54.26
HORVU1Hr1G028210.2	Barley	endoplasmic reticulum, extracellular, mitochondrion, plastid	41.43	53.7
VIT_18s0001g08330.t01	Wine grape	extracellular	49.29	52.67
CDY20664	Canola	extracellular	48.57	52.31
PGSC0003DMT400012718	Potato	extracellular, golgi	47.14	51.16
Solyc04g077150.2.1	Tomato	extracellular, golgi	47.14	51.16
Zm00001d007729_P001	Maize	extracellular, golgi, vacuole	53.57	51.02
Zm00001d040481_P001	Maize	extracellular, mitochondrion	51.43	49.32
HORVU4Hr1G011970.1	Barley	endoplasmic reticulum, extracellular, mitochondrion, plastid	47.86	49.26
Zm00001d040501_P001	Maize	extracellular, golgi, plastid	51.43	48.98
HORVU6Hr1G068400.2	Barley	endoplasmic reticulum, extracellular	47.86	47.52
HORVU2Hr1G086900.2	Barley	golgi, plasma membrane	52.14	44.24
Bra019965.1-P	Field mustard	golgi, plasma membrane	50.71	43.29
Zm00001d040493_P001	Maize	plastid	50.71	39.23
HORVU6Hr1G056080.4	Barley	endoplasmic reticulum, vacuole	10.71	34.09
Zm00001d023774_P002	Maize	extracellular, golgi, plasma membrane	39.29	33.54

Protein Annotations

EMBL:AK368689	EnsemblPlants:HORVU0Hr1G015930.1	EnsemblPlantsGene:HORVU0Hr1G015930	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Erg28	PANTHER:PTHR15451	PFAM:PF03694	TMHMM:TMhelix	UniParc:UPI0002007A4D	UniProt:F2DXS1
MapMan:35.1	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DXS1]

Coordinates

chrchrUn:-:86037138..86038327

Molecular Weight (calculated)

15500.9 Da

IEP (calculated)

9.791

GRAVY (calculated)

0.614

Length

140 amino acids

Sequence
(BLAST)

001: MSATGRKLAA LPALGWWLVV VGAVRLVFAW SGFFDAWAVR SGTYSNTHVT DVHARTVGVW TLLSCTLCFL CAFNLENKPL CAATLLSFVY AYGHFVAEYL
101: VYRTITAASL GTLGFFAVPS IIWTVLHWRN TLGYRATKRS

Best Arabidopsis Sequence Match ( AT1G10030.1 )
(BLAST)

001: MKALGYWLMV VGSLRLASVW FGFFNIWALR LAVFSQTTMS EVHGRTFGVW TLLTCTLCFL CAFNLENKPL YLATFLSFIY ALGHFLTEYL FYQTMTIANL
101: STVGFFAGTS IVWMLLEWNS LEQPHSKLS

Arabidopsis Description

ERG28Ergosterol biosynthetic protein 28 [Source:UniProtKB/Swiss-Prot;Acc:O80594]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.