Factsheet for Os01t0732100-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plastid
PProwler:	mitochondrion
YLoc:	cytosol

mitochondrion: 19010998
plastid: 21433289
mitochondrion: 23027867

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0200500-01
Os05t0520100-00
Os06t0101800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31490.1	Os06t0101800-01	AT1G01010.1	21798944
AT2G31490.1	Os01t0200500-01	AT3G16310.1	21798944
AT2G31490.1	Os05t0520100-00	AT3G16310.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0750800-02	Rice	cytosol	81.18	97.18
EES01418	Sorghum	cytosol	81.18	97.18
GSMUA_Achr3P15720_001	Banana	cytosol	70.59	84.51
VIT_12s0055g00700.t01	Wine grape	cytosol	65.88	78.87
Bra018237.1-P	Field mustard	cytosol	60.0	71.83
CDY34488	Canola	cytosol	60.0	71.83
CDY23940	Canola	cytosol	60.0	71.83
CDY19085	Canola	cytosol	60.0	71.83
CDY15390	Canola	cytosol	60.0	71.83
CDY10808	Canola	cytosol	60.0	71.83
CDY10807	Canola	cytosol	60.0	71.83
CDX84783	Canola	cytosol	60.0	71.83
AT2G31490.1	Thale cress	cytosol	60.0	71.83
Solyc05g046390.2.1	Tomato	plastid	51.76	68.75
Bra022843.1-P	Field mustard	cytosol	47.06	58.82
KRH49068	Soybean	cytosol	50.59	57.33
Solyc09g059220.1.1	Tomato	cytosol	47.06	54.05
Zm00001d012742_P001	Maize	cytosol	70.59	43.8
Zm00001d012469_P001	Maize	cytosol	69.41	43.07

Protein Annotations

EnsemblPlants:Os01t0732100-00	EnsemblPlantsGene:Os01g0732100	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR35479
PANTHER:PTHR35479:SF3	ProteinID:BAS74195.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000393999D	UniProt:A0A0P0V7T1
MapMan:35.2	:	:	:	:	:

Description

Conserved hypothetical protein. (Os01t0732100-00)

Coordinates

chr1:+:30533818..30536908

Molecular Weight (calculated)

9941.9 Da

IEP (calculated)

8.532

GRAVY (calculated)

-0.694

Length

85 amino acids

Sequence
(BLAST)

1: CTHRRQAGEG EEEKMGGGME VHKNRWIEEW NAGRENLEFN FRWTRRSLAV VGLFGLAVPI LVYKGIVREF HMQDEDAGRP PRKFL

Best Arabidopsis Sequence Match ( AT2G31490.1 )
(BLAST)

1: MGGGMETNKN KFIEDWGSAR ENLEHNFRWT RRNFALIGIF GIALPIIVYK GIVKDFHMQD EDAGRPHRKF L

Arabidopsis Description

AT2G31490 protein [Source:UniProtKB/TrEMBL;Acc:Q9SIQ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.