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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 7
  • cytosol 1
PPI

Inferred distinct locusB in Crop

locusBlocations
EER87676
EES02290
EES19830

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES01418 Sorghum cytosol 36.59 63.38
EES03615 Sorghum cytosol 35.77 61.97
Solyc05g046390.2.1 Tomato plastid 30.08 57.81
GSMUA_Achr3P15720_001 Banana cytosol 32.52 56.34
VIT_12s0055g00700.t01 Wine grape cytosol 29.27 50.7
Bra022843.1-P Field mustard cytosol 24.39 44.12
KRH49068 Soybean cytosol 26.83 44.0
Bra018237.1-P Field mustard cytosol 25.2 43.66
CDY34488 Canola cytosol 25.2 43.66
CDY23940 Canola cytosol 25.2 43.66
CDY19085 Canola cytosol 25.2 43.66
CDY15390 Canola cytosol 25.2 43.66
CDY10808 Canola cytosol 25.2 43.66
CDY10807 Canola cytosol 25.2 43.66
CDX84783 Canola cytosol 25.2 43.66
AT2G31490.1 Thale cress cytosol 25.2 43.66
Solyc09g059220.1.1 Tomato cytosol 21.14 35.14
Zm00001d012469_P001 Maize cytosol 34.96 31.39
Zm00001d012742_P001 Maize cytosol 34.96 31.39
Protein Annotations
EnsemblPlants:OQU91338EnsemblPlantsGene:SORBI_3001G164350PANTHER:PTHR35479PANTHER:PTHR35479:SF2ProteinID:OQU91338ProteinID:OQU91338.1
SEG:segUniParc:UPI000B8BA1A7UniProt:A0A1Z5S5Z6MapMan:35.2::
Description
hypothetical protein
Coordinates
chr1:-:13584051..13587984
Molecular Weight (calculated)
13097.8 Da
IEP (calculated)
10.906
GRAVY (calculated)
-0.162
Length
123 amino acids
Sequence
(BLAST)
001: MPSPDPAAPY PLSLSLPSAR AAPPAASRPP SSARAPAPAP APSPRPALLH RTSTLNKWIE ERNAGREHLE LNFRWTRRSL AVVGFFGLAV PILVYKGIVR
101: EFEYPSAIVG SGGGCMGGMH RSC
Best Arabidopsis Sequence Match ( AT2G31490.1 )
(BLAST)
1: MGGGMETNKN KFIEDWGSAR ENLEHNFRWT RRNFALIGIF GIALPIIVYK GIVKDFHMQD EDAGRPHRKF L
Arabidopsis Description
AT2G31490 protein [Source:UniProtKB/TrEMBL;Acc:Q9SIQ8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.