Factsheet for PGSC0003DMT400052998

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400011576
PGSC0003DMT400014960
PGSC0003DMT400014962
PGSC0003DMT400037245
PGSC0003DMT400052805
PGSC0003DMT400052998
PGSC0003DMT400057342
PGSC0003DMT400068352
PGSC0003DMT400076653
PGSC0003DMT400078266

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30360.1	PGSC0003DMT400052998	AT2G30360.1	17785451
AT2G30360.1	PGSC0003DMT400078266	AT2G30360.1	17785451
AT2G30360.1	PGSC0003DMT400014960	AT4G01420.1	11230129
AT2G30360.1	PGSC0003DMT400014962	AT4G01420.1	11230129
AT2G30360.1	PGSC0003DMT400011576	AT5G47100.1	14730064
AT2G30360.1	PGSC0003DMT400052805	AT5G47100.1	14730064
AT2G30360.1	PGSC0003DMT400068352	AT5G47100.1	14730064
AT2G30360.1	PGSC0003DMT400037245	AT5G55990.1	11230129
AT2G30360.1	PGSC0003DMT400057342	AT5G55990.1	11230129
AT2G30360.1	PGSC0003DMT400076653	AT5G55990.1	11230129
AT2G30360.1	PGSC0003DMT400037245	AT5G55990.1	11402167
AT2G30360.1	PGSC0003DMT400057342	AT5G55990.1	11402167
AT2G30360.1	PGSC0003DMT400076653	AT5G55990.1	11402167
AT2G30360.1	PGSC0003DMT400037245	AT5G55990.1	17483306
AT2G30360.1	PGSC0003DMT400057342	AT5G55990.1	17483306
AT2G30360.1	PGSC0003DMT400076653	AT5G55990.1	17483306

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g007440.2.1	Tomato	cytosol	94.39	94.61
PGSC0003DMT400078266	Potato	cytosol	59.87	63.72
VIT_06s0004g07870.t01	Wine grape	cytosol	59.19	60.55
CDY24005	Canola	cytosol	54.71	57.82
CDX84840	Canola	cytosol	54.93	57.38
CDY68071	Canola	cytosol	55.83	57.37
Bra027311.1-P	Field mustard	cytosol	47.09	57.22
Bra022794.1-P	Field mustard	cytosol	54.71	57.14
Bra021628.1-P	Field mustard	cytosol	48.88	56.92
CDY29680	Canola	cytosol	48.88	56.77
CDY54010	Canola	cytosol	48.65	56.66
AT2G30360.1	Thale cress	cytosol, nucleus, plastid	55.16	56.55
Bra018319.1-P	Field mustard	cytosol	55.83	56.33
CDY02060	Canola	cytosol	54.93	55.3
PGSC0003DMT400028840	Potato	cytosol	54.04	55.28
KRH72812	Soybean	cytosol	54.26	54.75
KRH17163	Soybean	cytosol	53.59	54.44
KRG98160	Soybean	cytosol	52.24	51.78
PGSC0003DMT400056629	Potato	cytosol	52.24	51.78
KRH18584	Soybean	cytosol	52.91	51.75
PGSC0003DMT400029044	Potato	cytosol	46.86	49.29
GSMUA_Achr8P01770_001	Banana	cytosol	37.89	49.27
GSMUA_Achr9P04780_001	Banana	cytosol	38.56	48.31
PGSC0003DMT400020443	Potato	cytosol	46.41	47.92
PGSC0003DMT400073291	Potato	cytosol	48.65	47.38
GSMUA_Achr6P32570_001	Banana	cytosol	38.56	46.87
PGSC0003DMT400073132	Potato	cytosol	50.0	46.65
PGSC0003DMT400073317	Potato	cytosol	46.64	46.22
PGSC0003DMT400030403	Potato	cytosol	45.07	45.17
PGSC0003DMT400074774	Potato	cytosol	44.39	44.9
PGSC0003DMT400074768	Potato	cytosol	43.95	44.24
PGSC0003DMT400019062	Potato	cytosol	44.84	43.86
PGSC0003DMT400052958	Potato	cytosol	45.52	43.19
PGSC0003DMT400036354	Potato	cytosol	45.52	43.19
PGSC0003DMT400068762	Potato	cytosol	34.98	42.16
PGSC0003DMT400049866	Potato	cytosol	43.27	39.63

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:102579507	MapMan:18.4.5.3	Gene3D:3.30.200.20	Gene3D:3.30.310.80	InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR018451	InterPro:Kinase-like_dom_sf	UniProt:M1BU92	InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069
PFAM:PF03822	EnsemblPlantsGene:PGSC0003DMG400020564	PGSC:PGSC0003DMG400020564	EnsemblPlants:PGSC0003DMT400052998	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR43895	PANTHER:PTHR43895:SF22	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002951990	RefSeq:XP_006344079.1
SEG:seg	:	:	:	:	:

Description

Avr9/Cf-9 rapidly elicited protein 216 [Source:PGSC_GENE;Acc:PGSC0003DMG400020564]

Coordinates

chr6:+:2846349..2848922

Molecular Weight (calculated)

50963.3 Da

IEP (calculated)

8.519

GRAVY (calculated)

-0.292

Length

446 amino acids

Sequence
(BLAST)

001: MALFSSSETT IFNKYELGKL LGCGAFAKVY HARDIKDGRS VAIKIINKTR VSNAILMANI KREISIMRLL RHPHIVKLDE VLATKTKIYF VMEFVKGGEL
101: FAKIAKTGKF SEDQSRKIFQ QLISAVRYCH SRGVYHRDLK PENLLIDENG DLKVSDFGLS ALTEQVQQDG LLHTLCGTPS YVAPDVLTKK GYDGAKADIW
201: TCGIILFVLN AGYLPFHDSN LMGMYHKIIN GEYKCPKWMS SELKRFLRRL LDTNPMTRIT IEEIMNDPWF KKGLKRVKFC EEDGKPHRRI QNSDSTGQDE
301: PSAEIEEVKE GDDKNKNSYL NAFDIISFSM GLDLSGLLND GFNPLEDFER LVVEGSLEIV MEIVEEMAKK ENMRLKKKKE WGIELKKGKL IMNMEIYRVI
401: DGFVVVEVRR KVGDIDMYKQ ILKNNMKPVI LGQQPMEVLI STEVDP

Best Arabidopsis Sequence Match ( AT2G30360.1 )
(BLAST)

001: MPEIEIAAGS GDNNDALFGK YELGKLLGCG AFAKVFHARD RRTGQSVAVK ILNKKKLLTN PALANNIKRE ISIMRRLSHP NIVKLHEVMA TKSKIFFAME
101: FVKGGELFNK ISKHGRLSED LSRRYFQQLI SAVGYCHARG VYHRDLKPEN LLIDENGNLK VSDFGLSALT DQIRPDGLLH TLCGTPAYVA PEILSKKGYE
201: GAKVDVWSCG IVLFVLVAGY LPFNDPNVMN MYKKIYKGEY RFPRWMSPDL KRFVSRLLDI NPETRITIDE ILKDPWFVRG GFKQIKFHDD EIEDQKVESS
301: LEAVKSLNAF DLISYSSGLD LSGLFAGCSN SSGESERFLS EKSPEMLAEE VEGFAREENL RMKKKKEEEY GFEMEGQNGK FGIGICISRL NDLLVVVEAR
401: RRGGDGDCYK EMWNGKLRVQ LIRVCDQTSS TNAAI

Arabidopsis Description

CIPK11CBL-interacting serine/threonine-protein kinase 11 [Source:UniProtKB/Swiss-Prot;Acc:O22932]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.