Factsheet for Solyc08g007160.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g021440.2.1
Solyc02g072530.1.1
Solyc04g076810.2.1
Solyc05g053210.2.1
Solyc06g007430.1.1
Solyc06g007440.2.1
Solyc06g082440.1.1
Solyc07g005440.1.1
Solyc08g067310.1.1
Solyc12g009570.1.1
Solyc12g010130.1.1
Solyc12g014050.1.1
Solyc12g098910.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47100.1	Solyc02g021440.2.1	AT1G30270.1	14730064
AT5G47100.1	Solyc02g021440.2.1	AT1G30270.1	16814720
AT5G47100.1	Solyc02g021440.2.1	AT1G30270.1	17898163
AT5G47100.1	Solyc05g053210.2.1	AT1G48260.1	14730064
AT5G47100.1	Solyc12g098910.1.1	AT1G48260.1	14730064
AT5G47100.1	Solyc08g067310.1.1	AT2G25090.1	14730064
AT5G47100.1	Solyc08g067310.1.1	AT2G25090.1	17898163
AT5G47100.1	Solyc06g007440.2.1	AT2G30360.1	14730064
AT5G47100.1	Solyc06g082440.1.1	AT2G30360.1	14730064
AT5G47100.1	Solyc06g007440.2.1	AT2G30360.1	21798944
AT5G47100.1	Solyc06g082440.1.1	AT2G30360.1	21798944
AT5G47100.1	Solyc12g014050.1.1	AT3G15090.1	21798944
AT5G47100.1	Solyc05g053210.2.1	AT3G17510.1	14730064
AT5G47100.1	Solyc12g098910.1.1	AT3G17510.1	14730064
AT5G47100.1	Solyc05g053210.2.1	AT3G17510.1	17092313
AT5G47100.1	Solyc12g098910.1.1	AT3G17510.1	17092313
AT5G47100.1	Solyc02g072530.1.1	AT4G18700.1	14730064
AT5G47100.1	Solyc04g076810.2.1	AT4G24400.1	14730064
AT5G47100.1	Solyc07g005440.1.1	AT4G30960.1	17898163
AT5G47100.1	Solyc12g010130.1.1	AT4G30960.1	17898163
AT5G47100.1	Solyc08g067310.1.1	AT5G10930.1	14730064
AT5G47100.1	Solyc12g009570.1.1	AT5G35410.1	14730064
AT5G47100.1	Solyc06g007430.1.1	AT5G58380.1	14730064

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g077770.2.1	Tomato	cytosol	81.4	82.16
GSMUA_AchrUn_...	Banana	cytosol	75.81	76.53
Bra012655.1-P	Field mustard	cytosol	75.35	76.06
Bra040169.1-P	Field mustard	cytosol	75.35	76.06
CDX90465	Canola	cytosol	75.35	76.06
CDY38412	Canola	cytosol	75.35	76.06
CDX78784	Canola	cytosol	74.88	75.59
GSMUA_Achr4P30070_001	Banana	cytosol	74.88	75.59
PGSC0003DMT400052805	Potato	cytosol	91.63	75.48
CDY09616	Canola	cytosol	73.95	74.65
GSMUA_Achr4P26350_001	Banana	cytosol	73.95	74.65
Solyc06g060980.1.1	Tomato	cytosol, mitochondrion	73.95	73.95
Zm00001d029976_P004	Maize	cytosol, mitochondrion	73.02	73.71
EER94470	Sorghum	cytosol	73.02	73.71
AT5G47100.1	Thale cress	cytosol	72.09	72.77
Os10t0564800-01	Rice	plasma membrane	72.09	72.77
TraesCS1B01G229300.1	Wheat	cytosol	72.56	72.56
HORVU1Hr1G055300.1	Barley	cytosol	72.56	72.56
TraesCS1A01G215800.1	Wheat	cytosol	72.56	72.56
TraesCSU01G178500.1	Wheat	cytosol	72.56	72.56
Bra017504.1-P	Field mustard	cytosol	71.63	72.3
Bra022104.1-P	Field mustard	cytosol	71.63	72.3
CDY28977	Canola	cytosol	71.63	72.3
CDY25987	Canola	cytosol	71.63	72.3
CDY69850	Canola	cytosol	71.63	72.3
CDY40580	Canola	cytosol	71.16	71.83
KRH57533	Soybean	mitochondrion	70.7	71.36
TraesCSU01G129500.1	Wheat	cytosol, mitochondrion	69.3	68.98
TraesCS5A01G545500.2	Wheat	cytosol	68.37	68.37
HORVU4Hr1G090270.10	Barley	cytosol	68.84	68.2
KRH28207	Soybean	cytosol	66.05	66.98
TraesCS4B01G379200.1	Wheat	cytosol	62.79	66.5
KRH04244	Soybean	cytosol	66.05	64.84
Zm00001d000046_P001	Maize	cytosol	50.23	61.36
Solyc03g083320.2.1	Tomato	cytosol	60.47	60.75
Solyc06g051970.2.1	Tomato	cytosol	60.0	60.28
Solyc07g065820.2.1	Tomato	cytosol	60.0	58.9
AT4G17615.3	Thale cress	cytosol	68.84	58.73
Solyc12g015870.1.1	Tomato	cytosol	58.6	56.25
Solyc02g032310.1.1	Tomato	cytosol	49.77	48.86
Solyc12g055920.1.1	Tomato	cytosol, mitochondrion	49.77	47.35
Solyc08g065330.2.1	Tomato	endoplasmic reticulum, extracellular	55.81	46.69
Solyc08g036590.1.1	Tomato	endoplasmic reticulum, extracellular	47.91	44.98
Solyc08g054570.1.1	Tomato	cytosol	38.14	44.09

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:EH_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	InterPro:IPR000261	InterPro:IPR002048
UniProt:K4CIK3	PFAM:PF12763	PFAM:PF13499	PRINTS:PR00450	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR23056	PANTHER:PTHR23056:SF41	SMART:SM00054	SUPFAM:SSF47473	EnsemblPlantsGene:Solyc08g007160.2	EnsemblPlants:Solyc08g007160.2.1
UniParc:UPI000276C43F	:	:	:	:	:

Description

No Description!

Coordinates

chr8:-:1710704..1715488

Molecular Weight (calculated)

24647.2 Da

IEP (calculated)

4.401

GRAVY (calculated)

-0.228

Length

215 amino acids

Sequence
(BLAST)

001: MGCFSSKVAR GHQFPGYEDP IFLASKTAFT VSEVQALFEM FKTISSTVID DGLISKEEFQ LALFENRKKE DLLANRIFDL FDLKQRGVVD FEDFVLAMNV
101: FHPNASQEDK LTFSFKLYDL DGSGYIERQE VKQMLIALLR ESEMKLADET IEIILDKTFS EADSNQDGKI DKSEWRSFVD RNPSLLKIMT LPYLRDVTTT
201: FPSFVFHSEV DEGAT

Best Arabidopsis Sequence Match ( AT4G17615.4 )
(BLAST)

001: MGCFHSKAAK EFRGHEDPVK LASETAFSVS EVEALFELFK SISSSVVDDG LINKEEFQLA LFKSRKRENI FANRIFDMFD VKRKGVIDFG DFVRSLNVFH
101: PNASLEDKID FTFRLYDMDC TGYIERQEVK QMLIALLCES EMKLADETIE IILDKTFEDA DVNQDGKIDK LEWSDFVNKN PSLLKIMTLP YLRDITTTFP
201: SFVFHSEVDE IAT

Arabidopsis Description

CBL1calcineurin B-like protein 1 [Source:TAIR;Acc:AT4G17615]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.