Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400023568 | Potato | cytosol | 95.33 | 95.33 |
| Solyc06g051970.2.1 | Tomato | cytosol | 80.37 | 80.37 |
| GSMUA_Achr4P08200_001 | Banana | cytosol | 70.09 | 68.49 |
| KXG32826 | Sorghum | cytosol | 65.89 | 64.68 |
| Os01t0598200-01 | Rice | cytosol, mitochondrion | 65.42 | 64.22 |
| Solyc08g077770.2.1 | Tomato | cytosol | 63.55 | 63.85 |
| Solyc06g060980.1.1 | Tomato | cytosol, mitochondrion | 63.08 | 62.79 |
| Solyc07g065820.2.1 | Tomato | cytosol | 63.55 | 62.1 |
| Solyc12g055920.1.1 | Tomato | cytosol, mitochondrion | 65.42 | 61.95 |
| Zm00001d010931_P001 | Maize | cytosol | 24.3 | 61.9 |
| Solyc08g007160.2.1 | Tomato | cytosol | 60.75 | 60.47 |
| Solyc12g015870.1.1 | Tomato | cytosol | 62.62 | 59.82 |
| Zm00001d044389_P001 | Maize | cytosol | 64.49 | 58.47 |
| Solyc08g036590.1.1 | Tomato | endoplasmic reticulum, extracellular | 58.41 | 54.59 |
| Solyc08g065330.2.1 | Tomato | endoplasmic reticulum, extracellular | 63.08 | 52.53 |
| Solyc02g032310.1.1 | Tomato | cytosol | 53.27 | 52.05 |
| Solyc08g054570.1.1 | Tomato | cytosol | 44.86 | 51.61 |
Protein Annotations
| EMBL:AB675686 | EMBL:AJ717347 | EnsemblPlants:Solyc03g083320.2.1 | EnsemblPlantsGene:Solyc03g083320.2 | Gene3D:1.10.238.10 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 |
| PANTHER:PTHR23056:SF59 | PFAM:PF13499 | PFAM:PF13833 | PFscan:PS50222 | PRINTS:PR00450 | SMART:SM00054 |
| SUPFAM:SSF47473 | UniParc:UPI000051AEDD | UniProt:Q4W3B4 | MapMan:26.6.1.1.1 | : | : |
Description
Calcineurin B-like molecule [Source:UniProtKB/TrEMBL;Acc:Q4W3B4]
Coordinates
chr3:+:53150912..53153637
Molecular Weight (calculated)
24573.3 Da
IEP (calculated)
4.257
GRAVY (calculated)
-0.143
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCFPSKICR FSTPGYEDPT LLAAETAFTV SEVEALYELF KKISSSIIDD GLIHKEEFQL AIFKNQNRRD LFADRIFDLF DFKRNGVIGF GEFVRSLSVF
101: HPNAPVADKI AFAFRLYDLR QTGYIEREEL KEMVLALLNE SDLILSDDIV EMIVDKTFDE ADKKSDGKID EEEWKEFVSM NPSLLKNMTL PYLKDITLAF
201: PSFVMNSEVE DSEV
101: HPNAPVADKI AFAFRLYDLR QTGYIEREEL KEMVLALLNE SDLILSDDIV EMIVDKTFDE ADKKSDGKID EEEWKEFVSM NPSLLKNMTL PYLKDITLAF
201: PSFVMNSEVE DSEV
001: MGCSVSKKKK KNAMRPPGYE DPELLASVTP FTVEEVEALY ELFKKLSSSI IDDGLIHKEE FQLALFRNRN RRNLFADRIF DVFDVKRNGV IEFGEFVRSL
101: GVFHPSAPVH EKVKFAFKLY DLRQTGFIER EELKEMVVAL LHESELVLSE DMIEVMVDKA FVQADRKNDG KIDIDEWKDF VSLNPSLIKN MTLPYLKDIN
201: RTFPSFVSSC EEEEMELQNV SS
101: GVFHPSAPVH EKVKFAFKLY DLRQTGFIER EELKEMVVAL LHESELVLSE DMIEVMVDKA FVQADRKNDG KIDIDEWKDF VSLNPSLIKN MTLPYLKDIN
201: RTFPSFVSSC EEEEMELQNV SS
Arabidopsis Description
CBL4Calcineurin B-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81223]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.