Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400057342 | Potato | cytosol, extracellular | 99.54 | 99.54 |
| Solyc12g015870.1.1 | Tomato | cytosol | 94.52 | 92.41 |
| KRH46425 | Soybean | endoplasmic reticulum | 94.06 | 91.15 |
| KRG98442 | Soybean | cytosol | 93.61 | 90.71 |
| GSMUA_Achr9P12840_001 | Banana | cytosol | 93.61 | 90.71 |
| Os03t0626800-01 | Rice | cytosol | 92.69 | 90.22 |
| CDX92814 | Canola | cytosol | 92.69 | 89.82 |
| CDY42728 | Canola | cytosol | 92.69 | 89.82 |
| Zm00001d033295_P001 | Maize | cytosol | 91.32 | 88.89 |
| CDY67196 | Canola | cytosol | 28.31 | 88.57 |
| AT5G55990.1 | Thale cress | cytosol, extracellular | 91.32 | 88.5 |
| CDX89324 | Canola | cytosol | 91.32 | 88.5 |
| CDX94315 | Canola | cytosol | 91.32 | 88.5 |
| Bra026421.1-P | Field mustard | cytosol | 87.67 | 88.07 |
| TraesCS4D01G068700.1 | Wheat | cytosol | 90.41 | 88.0 |
| Bra035598.1-P | Field mustard | cytosol | 90.41 | 87.61 |
| CDY64981 | Canola | cytosol | 90.41 | 87.61 |
| CDY06547 | Canola | cytosol | 90.41 | 87.61 |
| TraesCS4A01G245500.1 | Wheat | cytosol | 89.95 | 87.56 |
| AT4G26570.2 | Thale cress | cytosol | 91.32 | 86.96 |
| HORVU4Hr1G011670.1 | Barley | vacuole | 88.58 | 86.22 |
| HORVU5Hr1G016320.1 | Barley | cytosol | 87.67 | 85.33 |
| Os12t0597000-01 | Rice | plasma membrane, vacuole | 87.67 | 85.33 |
| TraesCS5D01G072100.1 | Wheat | cytosol | 87.67 | 85.33 |
| TraesCS5B01G071500.1 | Wheat | cytosol | 87.67 | 85.33 |
| TraesCS5A01G060600.1 | Wheat | cytosol | 87.67 | 85.33 |
| OQU79501 | Sorghum | cytosol | 86.76 | 84.44 |
| Zm00001d030955_P003 | Maize | cytosol | 86.3 | 84.0 |
| CDY11963 | Canola | cytosol | 90.41 | 83.19 |
| CDY36774 | Canola | cytosol | 89.95 | 82.77 |
| Bra028949.1-P | Field mustard | cytosol | 83.11 | 82.73 |
| Zm00001d041392_P001 | Maize | cytosol, extracellular | 63.01 | 80.7 |
| Solyc02g032310.1.1 | Tomato | cytosol | 73.06 | 73.06 |
| TraesCS4B01G069900.1 | Wheat | cytosol | 83.56 | 70.38 |
| Solyc03g083320.2.1 | Tomato | cytosol | 62.1 | 63.55 |
| Solyc08g077770.2.1 | Tomato | cytosol | 61.19 | 62.91 |
| Solyc08g007160.2.1 | Tomato | cytosol | 58.9 | 60.0 |
| Solyc06g051970.2.1 | Tomato | cytosol | 58.45 | 59.81 |
| CDX89325 | Canola | plastid | 74.43 | 59.27 |
| Solyc06g060980.1.1 | Tomato | cytosol, mitochondrion | 57.99 | 59.07 |
| Bra026422.1-P | Field mustard | cytosol, plastid | 63.01 | 55.2 |
| CDX94316 | Canola | plastid | 69.41 | 55.07 |
| Solyc12g055920.1.1 | Tomato | cytosol, mitochondrion | 54.79 | 53.1 |
| Solyc08g065330.2.1 | Tomato | endoplasmic reticulum, extracellular | 61.19 | 52.14 |
| Solyc08g036590.1.1 | Tomato | endoplasmic reticulum, extracellular | 50.68 | 48.47 |
| Solyc08g054570.1.1 | Tomato | cytosol | 39.27 | 46.24 |
| VIT_00s0194g00040.t01 | Wine grape | cytosol | 18.26 | 9.88 |
Protein Annotations
| EMBL:AB675688 | EnsemblPlants:Solyc07g065820.2.1 | EnsemblPlantsGene:Solyc07g065820.2 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF57 |
| PFAM:PF13499 | PFAM:PF13833 | PFscan:PS50222 | PRINTS:PR00450 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI00022F88FB | UniProt:G5EM34 | MapMan:35.1 | : | : | : |
Description
Calcineurin B-like molecule [Source:UniProtKB/TrEMBL;Acc:G5EM34]
Coordinates
chr7:+:67428686..67432794
Molecular Weight (calculated)
25180.9 Da
IEP (calculated)
4.487
GRAVY (calculated)
-0.268
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MLQCLGSYLS RCCDLDFKQS GGLDDPEILA RETVFSVSEI EALYELFKKI SSAVIDDGLI NKEEFQLALF KTNKKESLFA DRVFDLFDTK HNGILGFEEF
101: ARALSVFHPN APIDDKIEFS FQLYDLKQQG FIERQEVKQM VVATLAESGM NLSDDVIESI IDKTFEEADT KHDGKIDKEE WRNLVLRHPS LLKNMTLQYL
201: KDITTTFPSF VFHSRVEDT
101: ARALSVFHPN APIDDKIEFS FQLYDLKQQG FIERQEVKQM VVATLAESGM NLSDDVIESI IDKTFEEADT KHDGKIDKEE WRNLVLRHPS LLKNMTLQYL
201: KDITTTFPSF VFHSRVEDT
001: MSQCIDGFKH VCSSFFRCFD IDIYKQSGGL GDPELLARET VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT
Arabidopsis Description
ATCBL3calcineurin B-like 3 [Source:TAIR;Acc:AT4G26570]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.