Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
vacuole:
15980189
|
plasma membrane:
27800704
|
gfp PMID:
15980189
doi
Department of Plant and Microbial Biology, University of California, Berkeley, California 94720-3102, USA.
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d030955_P003 | Maize | cytosol | 95.11 | 95.11 |
| OQU79501 | Sorghum | cytosol | 94.67 | 94.67 |
| TraesCS5D01G072100.1 | Wheat | cytosol | 94.22 | 94.22 |
| TraesCS5B01G071500.1 | Wheat | cytosol | 94.22 | 94.22 |
| TraesCS5A01G060600.1 | Wheat | cytosol | 94.22 | 94.22 |
| HORVU5Hr1G016320.1 | Barley | cytosol | 94.22 | 94.22 |
| Os03t0626800-01 | Rice | cytosol | 92.44 | 92.44 |
| Zm00001d041392_P001 | Maize | cytosol, extracellular | 69.78 | 91.81 |
| GSMUA_Achr9P12840_001 | Banana | cytosol | 88.89 | 88.5 |
| KRH46425 | Soybean | endoplasmic reticulum | 88.44 | 88.05 |
| Solyc07g065820.2.1 | Tomato | cytosol | 85.33 | 87.67 |
| KRG98442 | Soybean | cytosol | 88.0 | 87.61 |
| PGSC0003DMT400057342 | Potato | cytosol, extracellular | 84.89 | 87.21 |
| CDX92814 | Canola | cytosol | 87.56 | 87.17 |
| CDY42728 | Canola | cytosol | 87.56 | 87.17 |
| CDY67196 | Canola | cytosol | 26.67 | 85.71 |
| PGSC0003DMT400076653 | Potato | cytosol | 85.33 | 85.71 |
| Solyc12g015870.1.1 | Tomato | cytosol | 85.33 | 85.71 |
| PGSC0003DMT400037245 | Potato | cytosol | 84.44 | 85.59 |
| CDY64981 | Canola | cytosol | 85.33 | 84.96 |
| AT5G55990.1 | Thale cress | cytosol, extracellular | 85.33 | 84.96 |
| CDY06547 | Canola | cytosol | 85.33 | 84.96 |
| Bra035598.1-P | Field mustard | cytosol | 85.33 | 84.96 |
| AT4G26570.2 | Thale cress | cytosol | 86.67 | 84.78 |
| CDX94315 | Canola | cytosol | 84.89 | 84.51 |
| CDX89324 | Canola | cytosol | 84.89 | 84.51 |
| Bra026421.1-P | Field mustard | cytosol | 81.33 | 83.94 |
| Os12t0162400-01 | Rice | plasma membrane | 81.78 | 81.42 |
| CDY11963 | Canola | cytosol | 85.33 | 80.67 |
| CDY36774 | Canola | cytosol | 84.89 | 80.25 |
| Bra028949.1-P | Field mustard | cytosol | 77.78 | 79.55 |
| Os02t0480800-00 | Rice | cytosol | 43.11 | 71.32 |
| Os10t0564800-01 | Rice | plasma membrane | 62.67 | 66.2 |
| Os02t0291000-00 | Rice | cytosol | 55.11 | 58.22 |
| CDX89325 | Canola | plastid | 70.67 | 57.82 |
| Os05t0534400-01 | Rice | plasma membrane | 52.0 | 55.71 |
| Os02t0291400-00 | Rice | plasma membrane | 52.44 | 55.4 |
| CDX94316 | Canola | plastid | 66.22 | 53.99 |
| Bra026422.1-P | Field mustard | cytosol, plastid | 59.56 | 53.6 |
| Os01t0598200-01 | Rice | cytosol, mitochondrion | 51.11 | 52.75 |
| Os01t0711500-00 | Rice | plastid | 56.44 | 47.74 |
| Os01t0579600-01 | Rice | cytosol | 32.0 | 33.03 |
| VIT_00s0194g00040.t01 | Wine grape | cytosol | 18.67 | 10.37 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:4352701 | ProteinID:ABA99199.2 | ProteinID:ABG22071.1 | ProteinID:BAF30209.1 |
| ProteinID:BAT17929.1 | EMBL:DQ201196 | ProteinID:EEE53537.1 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0016020 | GO:GO:0032578 | GO:GO:0046872 | InterPro:IPR002048 | EnsemblPlantsGene:Os12g0597000 |
| EnsemblPlants:Os12t0597000-01 | PFAM:PF13499 | PFAM:PF13833 | PRINTS:PR00450 | PFscan:PS50222 | PANTHER:PTHR23056 |
| PANTHER:PTHR23056:SF57 | UniProt:Q3HRP5 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00005C504A | RefSeq:XP_015620792.1 |
Description
CALCINEURIN B-LIKE PROTEIN 2Similar to Calcineurin B-like protein 2 (SOS3-like calcium binding protein 1). (Os12t0597000-01)
Coordinates
chr12:+:25063210..25068208
Molecular Weight (calculated)
25865.9 Da
IEP (calculated)
4.546
GRAVY (calculated)
-0.216
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQCLDGVRQ LLAVVFKCCD LELKQPRGLE DPQVLARETV FSVSEVEALY ELFKKISSAV IDDGLINKEE FQLALFKTSK KESLFADRVF DLFDTKHNGI
101: LGFDEFARAL SVFHPSAPLD EKIDFSFQLY DLKQQGYIER QEVKQMVVAT LAESGMNLSD EIIESIIDKT FEEADTKHDG RIDKEEWRNL VLRHPSLLKN
201: MTLQYLKDIT TTFPSFVFHS QVDDT
101: LGFDEFARAL SVFHPSAPLD EKIDFSFQLY DLKQQGYIER QEVKQMVVAT LAESGMNLSD EIIESIIDKT FEEADTKHDG RIDKEEWRNL VLRHPSLLKN
201: MTLQYLKDIT TTFPSFVFHS QVDDT
001: MSQCIDGFKH VCSSFFRCFD IDIYKQSGGL GDPELLARET VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT
Arabidopsis Description
ATCBL3calcineurin B-like 3 [Source:TAIR;Acc:AT4G26570]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.