Factsheet for Os02t0178000-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os10t0564800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57630.1	Os10t0564800-01	AT5G47100.1	14730064

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G179100.1	Wheat	peroxisome	77.29	76.77
HORVU6Hr1G030150.2	Barley	cytosol	77.75	76.7
TraesCS6D01G141000.1	Wheat	cytosol	77.98	76.23
GSMUA_Achr1P10280_001	Banana	cytosol	65.83	62.39
Bra006809.1-P	Field mustard	cytosol	52.06	58.81
Bra002712.1-P	Field mustard	cytosol	54.13	58.42
TraesCS6A01G151000.1	Wheat	cytosol	70.18	57.84
Os12t0132200-01	Rice	cytosol	33.95	57.59
CDY25896	Canola	cytosol	54.59	57.21
AT5G57630.1	Thale cress	cytosol	54.13	56.73
CDX88633	Canola	cytosol	53.21	56.45
CDY11858	Canola	cytosol	54.36	55.37
VIT_11s0052g01700.t01	Wine grape	cytosol	55.96	52.25
KRH02907	Soybean	cytosol	55.28	51.61
CDY49727	Canola	cytosol	46.1	50.76
Os07t0150700-01	Rice	mitochondrion	43.58	42.22
Os11t0134300-01	Rice	cytosol	38.76	41.73
Os03t0319400-01	Rice	mitochondrion	42.66	41.43
Os06t0606000-01	Rice	cytosol	42.66	41.06
Os07t0637000-01	Rice	cytosol	41.74	40.99
Os07t0687000-01	Rice	cytosol, mitochondrion	41.51	40.67
Os01t0536000-01	Rice	cytosol	39.22	38.34
Os01t0292200-01	Rice	cytosol	40.37	38.18
Os05t0136200-01	Rice	cytosol	39.68	38.11
Os03t0126800-00	Rice	plasma membrane	41.05	37.45
Os05t0530500-02	Rice	cytosol, plasma membrane	32.11	27.72
Os08t0484600-01	Rice	cytosol	31.65	27.11
Os03t0289100-02	Rice	plasma membrane	31.42	25.0
Os07t0194100-01	Rice	cytosol	28.21	22.49

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.3	Gene3D:3.30.200.20	Gene3D:3.30.310.80	EntrezGene:4328489	EMBL:AK111625	ProteinID:BAD27991.1
ProteinID:BAF07987.1	ProteinID:BAS77275.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005773	GO:GO:0005829	GO:GO:0006464	GO:GO:0006468
GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628
GO:GO:0009705	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	GO:GO:0035556	GO:GO:0071470	GO:GO:0071472	InterPro:IPR000719	InterPro:IPR018451
InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom	EnsemblPlantsGene:Os02g0178000	EnsemblPlants:Os02t0178000-01	PFAM:PF00069
PFAM:PF03822	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816
PANTHER:PTHR24343	PANTHER:PTHR24343:SF123	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q6ETM9	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00003CE599	RefSeq:XP_015626127.1	SEG:seg	:

Description

Similar to SNF1 related protein kinase-like protein. (Os02t0178000-01)

Coordinates

chr2:-:4306895..4309939

Molecular Weight (calculated)

48851.6 Da

IEP (calculated)

6.905

GRAVY (calculated)

-0.225

Length

436 amino acids

Sequence
(BLAST)

001: MGFVESIGRY RVGRTIGAGT FAKVRLAVDA DTGATVAVKV IDKRMVIRNN LMYQVKREIT AMKLLNHPNI VKIYEVIATK TKICLVMEYV SGGQLSDKLS
101: YLKRLDEKEA KKYFYQLIDA VDYCHRRGVY HRDLKPENLL VDNQGNLKVS DFGLSVLKKP GQFLSTSCGS PCYVAPEVIQ HKSYDGAAAD VWSCGVILFE
201: LLAGYLPFQD CSLTNLYRRI SRAQFVFPQW LSVPQKKIII RILDPSPITR AKISDIFDDK WLQDHCNPSA RIENDDDCDV IEEASTDSDS SHNTEVKETE
301: EMTAETDRFI NAFQLIARCS DLDLSGLFQE QKTKLASPHP VQETFDKIKV AAKDVSMAVK RMNSSLVEIQ DSKLLPRSNL DLTLSAEVIK VTPAHCVVEV
401: SKSTGDLRSY KEFCRSLSSL LNGGQLSASS SDMECD

Best Arabidopsis Sequence Match ( AT5G57630.1 )
(BLAST)

001: MGLFGTKKIG KYEIGRTIGE GNFAKVKLGY DTTNGTYVAV KIIDKALVIQ KGLESQVKRE IRTMKLLNHP NIVQIHEVIG TKTKICIVME YVSGGQLSDR
101: LGRQKMKESD ARKLFQQLID AVDYCHNRGV YHRDLKPQNL LLDSKGNLKV SDFGLSAVPK SGDMLSTACG SPCYIAPELI MNKGYSGAAV DVWSCGVILF
201: ELLAGYPPFD DHTLPVLYKK ILRADYTFPP GFTGEQKRLI FNILDPNPLS RITLAEIIIK DSWFKIGYTP VYHQLSDSIK DNVAEINAAT ASSNFINAFQ
301: IIAMSSDLDL SGLFEENDDK RYKTRIGSKN TAQETIKKIE AAATYVSLSV ERIKHFKVKI QPKEIRSRSS YDLLSAEVIE VTPTNCVIEI SKSAGELRLY
401: MEFCQSLSSL LTAEVS

Arabidopsis Description

CIPK21CBL-interacting serine/threonine-protein kinase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q94CG0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.