CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94316	Canola	plastid	93.09	92.75
Solyc07g065820.2.1	Tomato	cytosol	59.27	74.43
PGSC0003DMT400057342	Potato	cytosol, extracellular	59.27	74.43
CDX89324	Canola	cytosol	60.0	73.01
CDX94315	Canola	cytosol	60.0	73.01
CDY42728	Canola	cytosol	59.64	72.57
CDX92814	Canola	cytosol	59.64	72.57
KRG98442	Soybean	cytosol	59.64	72.57
KRH46425	Soybean	endoplasmic reticulum	59.64	72.57
Os03t0626800-01	Rice	cytosol	59.27	72.44
Solyc12g015870.1.1	Tomato	cytosol	58.91	72.32
PGSC0003DMT400076653	Potato	cytosol	58.91	72.32
GSMUA_Achr9P12840_001	Banana	cytosol	58.91	71.68
Zm00001d033295_P001	Maize	cytosol	58.55	71.56
CDY06547	Canola	cytosol	58.55	71.24
CDY64981	Canola	cytosol	58.55	71.24
Os12t0597000-01	Rice	plasma membrane, vacuole	57.82	70.67
TraesCS4A01G245500.1	Wheat	cytosol	57.82	70.67
TraesCS4D01G068700.1	Wheat	cytosol	57.82	70.67
Zm00001d030955_P003	Maize	cytosol	57.82	70.67
PGSC0003DMT400037245	Potato	cytosol	56.73	70.27
OQU79501	Sorghum	cytosol	57.45	70.22
TraesCS5A01G060600.1	Wheat	cytosol	56.36	68.89
HORVU5Hr1G016320.1	Barley	cytosol	56.36	68.89
HORVU4Hr1G011670.1	Barley	vacuole	56.36	68.89
TraesCS5B01G071500.1	Wheat	cytosol	56.36	68.89
TraesCS5D01G072100.1	Wheat	cytosol	56.36	68.89
CDY36774	Canola	cytosol	59.27	68.49
Zm00001d041392_P001	Maize	cytosol, extracellular	42.55	68.42
CDY11963	Canola	cytosol	58.55	67.65
CDY62266	Canola	cytosol	11.64	66.67
CDY67196	Canola	cytosol	16.73	65.71
TraesCS4B01G069900.1	Wheat	cytosol	54.91	58.08
CDY34452	Canola	cytosol, extracellular	46.18	55.95
CDY32236	Canola	cytosol, extracellular	45.82	55.51
CDY28977	Canola	cytosol	41.82	53.99
CDX90465	Canola	cytosol	41.82	53.99
CDY09616	Canola	cytosol	41.82	53.99
CDY69850	Canola	cytosol	41.45	53.52
CDY25987	Canola	cytosol	41.45	53.52
CDY38412	Canola	cytosol	41.09	53.05
CDX78784	Canola	cytosol	41.09	53.05
CDY40580	Canola	cytosol	41.09	53.05
CDY04300	Canola	cytosol	24.0	50.38
CDY19840	Canola	cytosol	37.82	47.71
CDX87133	Canola	cytosol	36.73	46.76
CDY64882	Canola	mitochondrion	36.36	46.73
CDY46533	Canola	mitochondrion	36.36	46.73
CDX80425	Canola	cytosol	37.45	46.61
Zm00001d041393_P001	Maize	extracellular	18.18	46.3
CDY59968	Canola	cytosol, plasma membrane	37.09	46.15
CDY44281	Canola	cytosol	36.73	45.7
CDY28278	Canola	cytosol	40.0	44.72
CDX68929	Canola	cytosol, endoplasmic reticulum, mitochondrion	39.64	43.78
CDX75314	Canola	cytosol, endoplasmic reticulum	39.64	43.78
CDY45024	Canola	cytosol	38.91	43.5
CDX72384	Canola	cytosol	40.36	41.57
CDY13513	Canola	endoplasmic reticulum, nucleus, plasma membrane	32.73	41.47
CDY56859	Canola	cytosol	30.18	40.49
CDX92464	Canola	cytosol	29.45	39.51
VIT_00s0194g00040.t01	Wine grape	cytosol	12.0	8.15

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	GO:A0A078DJE9	EnsemblPlants:CDX89325	ProteinID:CDX89325	ProteinID:CDX89325.1
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
EnsemblPlantsGene:GSBRNA2T00149545001	InterPro:IPR002048	PFAM:PF13499	PFAM:PF13833	PRINTS:PR00450	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR23056	PANTHER:PTHR23056:SF51	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0004EF2051
SEG:seg	:	:	:	:	:

Description

BnaA01g15680D

Coordinates

chrLK031858:+:906743..908305

Molecular Weight (calculated)

31015.6 Da

IEP (calculated)

4.445

GRAVY (calculated)

-0.348

Length

275 amino acids

Sequence
(BLAST)

001: MSSLPILSSP SATNQPETKS AAVNRCNSES TVPGSSMEAK EAPPPTTVVS TQTQPITQPE TIIRPEEQSG TVEHNLSEIL ARDTVFSVSE IEALYDLYRK
101: ISSAVTDDGL INKEGFQLAL FMKNKKESLF SDRVFDLFDT KHNGILGFEE FARALSVFHP NAPIDDKIDF SFQLYDLKQQ GFIERQEVKQ MVVSTLAQAG
201: MKLPNDVTES IIDKTFEEVD TNRDGRIDKE EWRILVLKHP SLLKKITLEY LKDITTTFPS FVFDDDYCVS GLWFE

Best Arabidopsis Sequence Match ( AT4G16350.2 )
(BLAST)

001: MMMQCLDGLK HLALILLTCC DADPPKVRQN PKDVARGTVF TVNEIEALYE LFKSISKNGL IDKEQFQLVL FKMNTTRSLF ADRVFDLFDT KNTGILDFEA
101: FARSLSVFHP NAKFEDKIEF SFKLYDLNQQ GYIKRQEVKQ MVVRTLAESG MNLSDHVIES IIDKTFEEAD TKLDGKIDKE EWRSLVLRHP SLLQNMSLQH
201: LKDVTKTFPN FVFHTIVTDT PSELDG

Arabidopsis Description

CBL6Calcineurin B-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P6]
SUBAcon: [extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.