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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, endoplasmic reticulum, plastid
BaCelLo:cytosol
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX78272
CDX78945
CDX78949
CDX99356
CDY02896
CDY09323
CDY36813
CDY44603
CDY55834
CDY61658

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G33000.1 CDX78272 AT3G54840.1 17825054
AT4G33000.1 CDY02896 AT3G54840.1 17825054
AT4G33000.1 CDY55834 AT3G54840.1 17825054
AT4G33000.1 CDY61658 AT3G54840.1 17825054
AT4G33000.1 CDX78945 AT4G19640.1 17825054
AT4G33000.1 CDX78949 AT4G19640.1 17825054
AT4G33000.1 CDX99356 AT4G19640.1 17825054
AT4G33000.1 CDY09323 AT4G19640.1 17825054
AT4G33000.1 CDY36813 AT5G35410.1 17449811
AT4G33000.1 CDY44603 AT5G35410.1 17449811
AT4G33000.1 CDY36813 AT5G35410.1 17825054
AT4G33000.1 CDY44603 AT5G35410.1 17825054
AT4G33000.1 CDY36813 AT5G35410.1 19448033
AT4G33000.1 CDY44603 AT5G35410.1 19448033
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY13513 Canola endoplasmic reticulum, nucleus, plasma membrane 76.03 93.55
CDX75314 Canola cytosol, endoplasmic reticulum 84.27 90.36
CDX68929 Canola cytosol, endoplasmic reticulum, mitochondrion 83.52 89.56
CDY04300 Canola cytosol 42.32 86.26
CDY28278 Canola cytosol 78.28 84.96
CDY45024 Canola cytosol 77.9 84.55
AT4G33000.1 Thale cress golgi, plastid 77.53 80.86
VIT_04s0008g00950.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plastid 64.42 66.67
Solyc08g065330.2.1 Tomato endoplasmic reticulum, extracellular 64.04 66.54
VIT_04s0008g00960.t01 Wine grape plastid 60.3 64.14
Os01t0711500-00 Rice plastid 62.92 63.16
KRH44162 Soybean cytosol, extracellular 61.42 61.89
KRH47134 Soybean cytosol 60.3 61.22
GSMUA_Achr3P32370_001 Banana cytosol 59.93 60.61
CDY67196 Canola cytosol 15.73 60.0
TraesCS3A01G053300.1 Wheat golgi 64.79 59.25
CDY62266 Canola cytosol 10.49 58.33
TraesCS3D01G211300.1 Wheat cytosol 62.55 57.99
CDX94315 Canola cytosol 49.06 57.96
CDX89324 Canola cytosol 49.06 57.96
CDX92814 Canola cytosol 48.69 57.52
CDY42728 Canola cytosol 48.69 57.52
TraesCS3B01G064500.2 Wheat cytosol, golgi, mitochondrion 63.67 57.43
TraesCS3B01G235500.1 Wheat cytosol 61.8 57.29
KXG33232 Sorghum endoplasmic reticulum 60.67 57.24
PGSC0003DMT400076980 Potato mitochondrion 61.8 56.9
KRH05482 Soybean cytosol, plasma membrane, plastid 54.31 56.2
CDY06547 Canola cytosol 47.57 56.19
CDY64981 Canola cytosol 47.57 56.19
CDY19840 Canola cytosol 45.32 55.5
CDY09616 Canola cytosol 44.19 55.4
CDX80425 Canola cytosol 45.69 55.2
CDY28977 Canola cytosol 43.82 54.93
CDX90465 Canola cytosol 43.82 54.93
CDY40580 Canola cytosol 43.82 54.93
CDY25987 Canola cytosol 43.45 54.46
CDY69850 Canola cytosol 43.45 54.46
CDX87133 Canola cytosol 43.45 53.7
CDY38412 Canola cytosol 42.7 53.52
CDY11963 Canola cytosol 47.57 53.36
CDX78784 Canola cytosol 42.32 53.05
KXG32770 Sorghum cytosol, plastid 63.3 52.98
CDY36774 Canola cytosol 47.19 52.94
CDY44281 Canola cytosol 43.45 52.49
CDY64882 Canola mitochondrion 41.57 51.87
CDY46533 Canola mitochondrion 41.57 51.87
CDY59968 Canola cytosol, plasma membrane 42.7 51.58
CDY32236 Canola cytosol, extracellular 41.95 49.34
CDY34452 Canola cytosol, extracellular 41.2 48.46
Zm00001d044285_P003 Maize plastid 62.55 46.26
TraesCS3A01G208300.2 Wheat cytosol, mitochondrion 62.55 46.01
CDY56859 Canola cytosol 34.46 44.88
CDX92464 Canola cytosol 34.08 44.39
Os01t0579600-01 Rice cytosol 35.96 44.04
CDX89325 Canola plastid 41.57 40.36
CDX94316 Canola plastid 38.2 36.96
Protein Annotations
Gene3D:1.10.238.10MapMan:26.6.1.1.3GO:A0A078C859EnsemblPlants:CDX72384ProteinID:CDX72384ProteinID:CDX72384.1
InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0003674GO:GO:0005488GO:GO:0005509
EnsemblPlantsGene:GSBRNA2T00099877001InterPro:IPR002048PFAM:PF13499PFAM:PF13833PRINTS:PR00450ScanProsite:PS00018
PFscan:PS50222PANTHER:PTHR23056PANTHER:PTHR23056:SF26SMART:SM00054SUPFAM:SSF47473UniParc:UPI0004EDFC54
SEG:seg:::::
Description
BnaC07g44060D
Coordinates
chrLK031796:+:962487..964150
Molecular Weight (calculated)
31016.2 Da
IEP (calculated)
4.384
GRAVY (calculated)
0.036
Length
267 amino acids
Sequence
(BLAST)
001: MDLPGVSSIN FWERHFFFLW FFKNKQRSSS LTVGEQLCAV FIPLFAIFDF LFSTVGQCFG CRSRRSPQIC QQANLSLLAL DSPFSVNEVE ALYELFKKLS
101: CSIIDDGLIH KEELQLAIFQ APYGENLFLD RVFDLFDEKK NGVIEFEEFI HALSVFHPYA PIEEKIDFAF RLYDLRQTGF IEQEEVHQMV VDILMESEMI
201: LSDELVTMII DKTFADADSD KDGKISKEEW KVYVLKHPTL LKNMTLPYLK DVTTAFPSFI FNTEVED
Best Arabidopsis Sequence Match ( AT4G33000.2 )
(BLAST)
001: MEQVSSRSSS LTVGEQFCAV FIPFFAIIDV LVSSVGQCFD CRSTSPRTCQ HADLERLARE SQFSVNEVEA LYELFKKLSC SIIDDGLIHK EELRLALFQA
101: PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID KTFADADSDK
201: DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED
Arabidopsis Description
CBL10Calcineurin B-like 10 [Source:UniProtKB/TrEMBL;Acc:M5BEI3]
SUBAcon: [endoplasmic reticulum,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.