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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 2
  • plastid 2
  • mitochondrion 1
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78272 Canola cytosol 99.51 99.51
AT3G54840.1 Thale cress cytosol 93.1 93.56
CDY61658 Canola cytosol 89.16 89.6
VIT_13s0019g04680.t01 Wine grape cytosol 84.73 86.0
KRG91957 Soybean cytosol 83.25 84.5
GSMUA_Achr1P03160_001 Banana cytosol 71.92 82.95
TraesCS1A01G140700.1 Wheat cytosol 62.07 82.35
TraesCS4D01G267900.1 Wheat cytosol 67.49 82.04
PGSC0003DMT400019238 Potato cytosol 80.79 82.0
Solyc11g008430.1.1 Tomato cytosol 80.79 82.0
KRH34819 Soybean cytosol 80.3 79.51
Os03t0151900-01 Rice plasma membrane 75.37 76.88
OQU93218 Sorghum plastid 74.88 76.0
TraesCS4A01G035800.1 Wheat plastid 73.89 75.38
TraesCS4B01G268600.1 Wheat plastid 73.89 75.38
TraesCS1B01G157100.1 Wheat cytosol, plastid 73.89 75.0
TraesCS1D01G139500.1 Wheat cytosol, plastid 73.4 74.5
GSMUA_Achr5P10670_001 Banana cytosol 69.95 73.58
GSMUA_Achr4P29310_001 Banana plastid 75.86 70.32
Zm00001d048410_P004 Maize plastid 73.4 70.28
Bra007104.1-P Field mustard endoplasmic reticulum 96.06 70.14
Os10t0441800-01 Rice plasma membrane 77.83 63.2
CDY02896 Canola endoplasmic reticulum, golgi 78.33 59.11
HORVU4Hr1G072020.1 Barley cytosol 72.91 56.92
CDY23153 Canola cytosol 49.26 50.0
CDX82579 Canola cytosol 49.26 50.0
CDY13065 Canola cytosol 49.26 50.0
CDY39412 Canola cytosol 49.26 50.0
CDX99356 Canola cytosol 48.28 48.76
CDX78949 Canola cytosol 47.29 47.76
CDY48241 Canola cytosol 39.9 38.94
CDX74672 Canola cytosol 39.9 38.94
CDY30479 Canola cytosol 39.9 38.94
CDX83425 Canola cytosol 39.9 38.94
CDX95606 Canola cytosol 39.9 38.94
CDX78373 Canola cytosol 38.92 38.16
CDX81166 Canola cytosol 38.92 38.16
CDX69850 Canola cytosol 38.42 37.86
CDX96987 Canola cytosol 38.42 37.86
CDY13772 Canola cytosol 37.93 37.2
CDX81264 Canola cytosol 36.45 36.27
CDY63926 Canola cytosol 37.44 35.51
CDY18689 Canola cytosol 36.45 34.1
CDX78945 Canola cytosol 8.37 33.33
CDY09323 Canola extracellular, plastid, vacuole 18.23 32.46
CDY31610 Canola mitochondrion 37.44 29.46
CDX76936 Canola cytosol 37.93 28.0
CDY23446 Canola cytosol 39.9 13.48
Protein Annotations
MapMan:22.8.1.6Gene3D:3.40.50.300GO:A0A078IZA9UniProt:A0A078IZA9EnsemblPlants:CDY55834ProteinID:CDY55834
ProteinID:CDY55834.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005488
GO:GO:0005525GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00017383001InterPro:P-loop_NTPasePFAM:PF00071PRINTS:PR00449
PFscan:PS51419PANTHER:PTHR24073PANTHER:PTHR24073:SF618SMART:SM00173SMART:SM00174SMART:SM00175
SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPaseTIGRFAMs:TIGR00231UniParc:UPI0004EE556F:
Description
BnaCnng29270DBnaCnng29270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZA9]
Coordinates
chrLK033432:-:33949..36248
Molecular Weight (calculated)
21877.0 Da
IEP (calculated)
5.843
GRAVY (calculated)
-0.226
Length
203 amino acids
Sequence
(BLAST)
001: MGCAASLPGK NSGALNGLTS SENAAPADAK NLRVKLVLLG DSGVGKSCIV LQFVRGQFDA TSKVTVGASF LSQTITLQDS TTVKFEIWDT AGQERYSALA
101: PLYYRGAGVA VIVYDITSPE SFKKAQYWVK ELQKHGSPDI VMALVGNKAD LHEKREVPSE DGMELAEKNG MFFIETSAKT ADNINELFEE IGKRLPRPSQ
201: PSS
Best Arabidopsis Sequence Match ( AT3G54840.1 )
(BLAST)
001: MGCASSLPDR NSGTLSGLSN SENAVPADAK NLRVKLVLLG DSGVGKSCIV LRFVRGQFDA TSKVTVGASF LSQTIALQDS TTVKFEIWDT AGQERYSALA
101: PLYYRGAGVA VIVYDITSPE SFKKAQYWVK ELQKHGSPDI VMALVGNKAD LHEKREVPTE DGMELAEKNG MFFIETSAKT ADNINQLFEE IGKRLPRPAP
201: SS
Arabidopsis Description
RABF1Ras-related protein RABF1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CB01]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.