Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX78272 | Canola | cytosol | 99.51 | 99.51 |
AT3G54840.1 | Thale cress | cytosol | 93.1 | 93.56 |
CDY61658 | Canola | cytosol | 89.16 | 89.6 |
VIT_13s0019g04680.t01 | Wine grape | cytosol | 84.73 | 86.0 |
KRG91957 | Soybean | cytosol | 83.25 | 84.5 |
GSMUA_Achr1P03160_001 | Banana | cytosol | 71.92 | 82.95 |
TraesCS1A01G140700.1 | Wheat | cytosol | 62.07 | 82.35 |
TraesCS4D01G267900.1 | Wheat | cytosol | 67.49 | 82.04 |
PGSC0003DMT400019238 | Potato | cytosol | 80.79 | 82.0 |
Solyc11g008430.1.1 | Tomato | cytosol | 80.79 | 82.0 |
KRH34819 | Soybean | cytosol | 80.3 | 79.51 |
Os03t0151900-01 | Rice | plasma membrane | 75.37 | 76.88 |
OQU93218 | Sorghum | plastid | 74.88 | 76.0 |
TraesCS4A01G035800.1 | Wheat | plastid | 73.89 | 75.38 |
TraesCS4B01G268600.1 | Wheat | plastid | 73.89 | 75.38 |
TraesCS1B01G157100.1 | Wheat | cytosol, plastid | 73.89 | 75.0 |
TraesCS1D01G139500.1 | Wheat | cytosol, plastid | 73.4 | 74.5 |
GSMUA_Achr5P10670_001 | Banana | cytosol | 69.95 | 73.58 |
GSMUA_Achr4P29310_001 | Banana | plastid | 75.86 | 70.32 |
Zm00001d048410_P004 | Maize | plastid | 73.4 | 70.28 |
Bra007104.1-P | Field mustard | endoplasmic reticulum | 96.06 | 70.14 |
Os10t0441800-01 | Rice | plasma membrane | 77.83 | 63.2 |
CDY02896 | Canola | endoplasmic reticulum, golgi | 78.33 | 59.11 |
HORVU4Hr1G072020.1 | Barley | cytosol | 72.91 | 56.92 |
CDY23153 | Canola | cytosol | 49.26 | 50.0 |
CDX82579 | Canola | cytosol | 49.26 | 50.0 |
CDY13065 | Canola | cytosol | 49.26 | 50.0 |
CDY39412 | Canola | cytosol | 49.26 | 50.0 |
CDX99356 | Canola | cytosol | 48.28 | 48.76 |
CDX78949 | Canola | cytosol | 47.29 | 47.76 |
CDY48241 | Canola | cytosol | 39.9 | 38.94 |
CDX74672 | Canola | cytosol | 39.9 | 38.94 |
CDY30479 | Canola | cytosol | 39.9 | 38.94 |
CDX83425 | Canola | cytosol | 39.9 | 38.94 |
CDX95606 | Canola | cytosol | 39.9 | 38.94 |
CDX78373 | Canola | cytosol | 38.92 | 38.16 |
CDX81166 | Canola | cytosol | 38.92 | 38.16 |
CDX69850 | Canola | cytosol | 38.42 | 37.86 |
CDX96987 | Canola | cytosol | 38.42 | 37.86 |
CDY13772 | Canola | cytosol | 37.93 | 37.2 |
CDX81264 | Canola | cytosol | 36.45 | 36.27 |
CDY63926 | Canola | cytosol | 37.44 | 35.51 |
CDY18689 | Canola | cytosol | 36.45 | 34.1 |
CDX78945 | Canola | cytosol | 8.37 | 33.33 |
CDY09323 | Canola | extracellular, plastid, vacuole | 18.23 | 32.46 |
CDY31610 | Canola | mitochondrion | 37.44 | 29.46 |
CDX76936 | Canola | cytosol | 37.93 | 28.0 |
CDY23446 | Canola | cytosol | 39.9 | 13.48 |
Protein Annotations
MapMan:22.8.1.6 | Gene3D:3.40.50.300 | GO:A0A078IZA9 | UniProt:A0A078IZA9 | EnsemblPlants:CDY55834 | ProteinID:CDY55834 |
ProteinID:CDY55834.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00017383001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF618 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EE556F | : |
Description
BnaCnng29270DBnaCnng29270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZA9]
Coordinates
chrLK033432:-:33949..36248
Molecular Weight (calculated)
21877.0 Da
IEP (calculated)
5.843
GRAVY (calculated)
-0.226
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCAASLPGK NSGALNGLTS SENAAPADAK NLRVKLVLLG DSGVGKSCIV LQFVRGQFDA TSKVTVGASF LSQTITLQDS TTVKFEIWDT AGQERYSALA
101: PLYYRGAGVA VIVYDITSPE SFKKAQYWVK ELQKHGSPDI VMALVGNKAD LHEKREVPSE DGMELAEKNG MFFIETSAKT ADNINELFEE IGKRLPRPSQ
201: PSS
101: PLYYRGAGVA VIVYDITSPE SFKKAQYWVK ELQKHGSPDI VMALVGNKAD LHEKREVPSE DGMELAEKNG MFFIETSAKT ADNINELFEE IGKRLPRPSQ
201: PSS
001: MGCASSLPDR NSGTLSGLSN SENAVPADAK NLRVKLVLLG DSGVGKSCIV LRFVRGQFDA TSKVTVGASF LSQTIALQDS TTVKFEIWDT AGQERYSALA
101: PLYYRGAGVA VIVYDITSPE SFKKAQYWVK ELQKHGSPDI VMALVGNKAD LHEKREVPTE DGMELAEKNG MFFIETSAKT ADNINQLFEE IGKRLPRPAP
201: SS
101: PLYYRGAGVA VIVYDITSPE SFKKAQYWVK ELQKHGSPDI VMALVGNKAD LHEKREVPTE DGMELAEKNG MFFIETSAKT ADNINQLFEE IGKRLPRPAP
201: SS
Arabidopsis Description
RABF1Ras-related protein RABF1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CB01]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.