Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037641.1-P | Field mustard | cytosol | 34.44 | 99.52 |
| CDY30479 | Canola | cytosol | 34.44 | 99.52 |
| CDY48241 | Canola | cytosol | 34.11 | 98.56 |
| AT2G44610.1 | Thale cress | cytosol | 34.11 | 98.56 |
| CDX95606 | Canola | cytosol | 34.11 | 98.56 |
| CDX83425 | Canola | cytosol | 34.11 | 98.56 |
| CDX74672 | Canola | cytosol | 33.94 | 98.08 |
| TraesCS2D01G234600.1 | Wheat | plastid | 31.95 | 92.31 |
| GSMUA_Achr5P12680_001 | Banana | plasma membrane | 31.95 | 92.31 |
| HORVU2Hr1G050270.2 | Barley | cytosol | 31.95 | 92.31 |
| Os07t0496000-01 | Rice | plasma membrane | 31.95 | 92.31 |
| TraesCS2A01G236600.1 | Wheat | cytosol | 31.95 | 92.31 |
| TraesCS2B01G261200.1 | Wheat | cytosol | 31.95 | 92.31 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.78 | 91.83 |
| Zm00001d006433_P001 | Maize | plasma membrane | 31.61 | 91.35 |
| EER97251 | Sorghum | cytosol | 31.61 | 91.35 |
| GSMUA_Achr1P00610_001 | Banana | cytosol | 27.12 | 91.06 |
| CDX96987 | Canola | cytosol | 30.12 | 87.86 |
| CDX69850 | Canola | cytosol | 29.62 | 86.41 |
| CDX81166 | Canola | cytosol | 29.62 | 85.99 |
| CDX78373 | Canola | cytosol | 29.62 | 85.99 |
| CDY13772 | Canola | cytosol | 28.95 | 84.06 |
| CDY63926 | Canola | cytosol | 27.79 | 78.04 |
| Zm00001d021551_P002 | Maize | cytosol | 31.78 | 75.2 |
| CDX81264 | Canola | cytosol | 24.96 | 73.53 |
| CDY18689 | Canola | cytosol | 24.79 | 68.66 |
| CDY31610 | Canola | mitochondrion | 28.62 | 66.67 |
| CDX76936 | Canola | cytosol | 27.12 | 59.27 |
| CDY39412 | Canola | cytosol | 13.81 | 41.5 |
| CDX82579 | Canola | cytosol | 13.81 | 41.5 |
| CDX99356 | Canola | cytosol | 13.64 | 40.8 |
| CDY23153 | Canola | cytosol | 13.48 | 40.5 |
| CDY13065 | Canola | cytosol | 13.31 | 40.0 |
| CDY55834 | Canola | cytosol, plastid | 13.48 | 39.9 |
| CDX78272 | Canola | cytosol | 13.48 | 39.9 |
| CDX78949 | Canola | cytosol | 13.31 | 39.8 |
| CDY61658 | Canola | cytosol | 13.31 | 39.6 |
| CDX78945 | Canola | cytosol | 2.83 | 33.33 |
| CDY09323 | Canola | extracellular, plastid, vacuole | 5.82 | 30.7 |
| Zm00001d024612_P011 | Maize | mitochondrion | 13.81 | 28.82 |
| CDY02896 | Canola | endoplasmic reticulum, golgi | 10.98 | 24.54 |
Protein Annotations
| MapMan:22.8.1.8 | Gene3D:3.40.50.300 | GO:A0A078GDI3 | UniProt:A0A078GDI3 | EnsemblPlants:CDY23446 | ProteinID:CDY23446 |
| ProteinID:CDY23446.1 | InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00022060001 | InterPro:Helicase_ATP-bd |
| InterPro:IPR014001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PFAM:PF07717 | PFAM:PF13604 | PRINTS:PR00449 |
| ScanProsite:PS00690 | PFscan:PS51192 | PFscan:PS51419 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF117 | SMART:SM00173 |
| SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SMART:SM00487 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EEC375 | SEG:seg | : | : |
Description
BnaC04g49740DBnaC04g49740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDI3]
Coordinates
chrLK032143:-:496282..502566
Molecular Weight (calculated)
67632.2 Da
IEP (calculated)
6.526
GRAVY (calculated)
-0.191
Length
601 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLQEVRKSL PIYGYHEQLL QAVEEHQVLV IVGDTGSGKT TQIPQYLHDA GYTKRGKVGC TQPRRVAAMS VAARVAQEMG VKLGHEVGYS IRFDKTVVKY
101: MTDGMLLREL LGEPDLASYS VVIVDEAHER ALSTDILFGL VKATRFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
201: VTVLTIHVRE PPPRDILVFL TGQEEIETAE EMLKQRIRGF GTKIRELIIC PIYANLPSEL QANIFEPTPQ GLVERVEIEI SSSNMNELDS VRKSIVAGFF
301: PHTARLQKNG SYRTVKHPQT VHIHPNSGLS QVLPRWVVYH ELVLTSKEYM RQLKPEWLIE LAPHYYQLKD VEDDWETPSS ATYLRSVSIS RFSMAPVSAL
401: AKYKLVFLGD QSVGKTSIIT RFMYDKFDNT YQATIGIDFL SKTMYLEDRT VRLQLWDTAG QERFRSLIPS YIRDSSVAVI VYDVASRQSF LNTAKWIDEV
501: RTERGSDVIV VLVGNKTDLV DKRQVSIEEA EAKARELNVI FIETSAKAGF NIKALFRKIA AALPGMETLS STKQEDMVDV NLKSSNANAS SAQQQSGGCS
601: C
101: MTDGMLLREL LGEPDLASYS VVIVDEAHER ALSTDILFGL VKATRFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
201: VTVLTIHVRE PPPRDILVFL TGQEEIETAE EMLKQRIRGF GTKIRELIIC PIYANLPSEL QANIFEPTPQ GLVERVEIEI SSSNMNELDS VRKSIVAGFF
301: PHTARLQKNG SYRTVKHPQT VHIHPNSGLS QVLPRWVVYH ELVLTSKEYM RQLKPEWLIE LAPHYYQLKD VEDDWETPSS ATYLRSVSIS RFSMAPVSAL
401: AKYKLVFLGD QSVGKTSIIT RFMYDKFDNT YQATIGIDFL SKTMYLEDRT VRLQLWDTAG QERFRSLIPS YIRDSSVAVI VYDVASRQSF LNTAKWIDEV
501: RTERGSDVIV VLVGNKTDLV DKRQVSIEEA EAKARELNVI FIETSAKAGF NIKALFRKIA AALPGMETLS STKQEDMVDV NLKSSNANAS SAQQQSGGCS
601: C
0001: MASNDLKTWV SDKLMMLLGY SQAAVVNYLI AMAKKTKSPT ELVGELVDYG FSSSGDTRSF AEEIFARVPR KTAGVNLYQK HEAEAAMLVR KQKTYALLDA
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
Arabidopsis Description
ESP3ESP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3A5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.