CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037641.1-P	Field mustard	cytosol	100.0	100.0
CDY48241	Canola	cytosol	99.04	99.04
AT2G44610.1	Thale cress	cytosol	99.04	99.04
CDX95606	Canola	cytosol	99.04	99.04
CDX83425	Canola	cytosol	99.04	99.04
CDX74672	Canola	cytosol	98.56	98.56
TraesCS2D01G234600.1	Wheat	plastid	92.79	92.79
TraesCS2B01G261200.1	Wheat	cytosol	92.79	92.79
TraesCS2A01G236600.1	Wheat	cytosol	92.79	92.79
Os07t0496000-01	Rice	plasma membrane	92.79	92.79
HORVU2Hr1G050270.2	Barley	cytosol	92.79	92.79
GSMUA_Achr5P12680_001	Banana	plasma membrane	92.79	92.79
GSMUA_AchrUn_...	Banana	cytosol	92.31	92.31
Zm00001d006433_P001	Maize	plasma membrane	91.83	91.83
EER97251	Sorghum	cytosol	91.83	91.83
GSMUA_Achr1P00610_001	Banana	cytosol	78.85	91.62
CDX96987	Canola	cytosol	86.54	87.38
CDX69850	Canola	cytosol	85.1	85.92
CDX78373	Canola	cytosol	85.1	85.51
CDX81166	Canola	cytosol	85.1	85.51
CDY13772	Canola	cytosol	83.17	83.57
CDY63926	Canola	cytosol	80.77	78.5
Zm00001d021551_P002	Maize	cytosol	92.31	75.59
CDX81264	Canola	cytosol	72.12	73.53
CDY18689	Canola	cytosol	71.63	68.66
CDY31610	Canola	mitochondrion	80.29	64.73
CDX76936	Canola	cytosol	77.88	58.91
CDY39412	Canola	cytosol	39.9	41.5
CDX82579	Canola	cytosol	39.9	41.5
CDX99356	Canola	cytosol	39.42	40.8
CDY23153	Canola	cytosol	38.94	40.5
CDY13065	Canola	cytosol	38.46	40.0
CDY55834	Canola	cytosol, plastid	38.94	39.9
CDX78272	Canola	cytosol	38.94	39.9
CDX78949	Canola	cytosol	38.46	39.8
CDY61658	Canola	cytosol	38.46	39.6
CDY23446	Canola	cytosol	99.52	34.44
CDX78945	Canola	cytosol	8.17	33.33
CDY09323	Canola	extracellular, plastid, vacuole	16.83	30.7
Zm00001d024612_P011	Maize	mitochondrion	40.38	29.17
CDY02896	Canola	endoplasmic reticulum, golgi	31.73	24.54

Protein Annotations

MapMan:22.8.1.8	Gene3D:3.40.50.300	GO:A0A078GZA7	UniProt:A0A078GZA7	EnsemblPlants:CDY30479	ProteinID:CDY30479
ProteinID:CDY30479.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00045186001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF840	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000254407D
SEG:seg	:	:	:	:	:

Description

BnaA04g25800DBnaA04g25800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZA7]

Coordinates

chrLK032253:-:429226..431552

Molecular Weight (calculated)

23075.6 Da

IEP (calculated)

8.164

GRAVY (calculated)

-0.149

Length

208 amino acids

Sequence
(BLAST)

001: MAPVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VASRQSFLNT
101: AKWIDEVRTE RGSDVIVVLV GNKTDLVDKR QVSIEEAEAK ARELNVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSTK QEDMVDVNLK SSNANASSAQ
201: QQSGGCSC

Best Arabidopsis Sequence Match ( AT2G44610.1 )
(BLAST)

001: MAPVSALAKY KLVFLGDQSV GKTSIITRFM YDKFDNTYQA TIGIDFLSKT MYLEDRTVRL QLWDTAGQER FRSLIPSYIR DSSVAVIVYD VASRQSFLNT
101: TKWIDEVRTE RGSDVIVVLV GNKTDLVDKR QVSIEEAEAK ARELNVMFIE TSAKAGFNIK ALFRKIAAAL PGMETLSSTK QEDMVDVNLK SSNANASLAQ
201: QQSGGCSC

Arabidopsis Description

RABH1BRas-related protein RABH1b [Source:UniProtKB/Swiss-Prot;Acc:O80501]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.